Gene : AL6G29090 A. lyrata v2.1

Defline:  (1 of 1) K00766 - anthranilate phosphoribosyltransferase (trpD) Genomic Order:  1806
Name:  ? AL6G29090 Secondary Identifier:  ? PAC:35928755

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata TRPSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G29090 0.5kb upstream 0.5kb upstream 3220   true scaffold_6: 7459631-7462850 Arabidopsis lyrata
AL6G29090 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 7459631-7460130 Arabidopsis lyrata
AL6G29090 0.5kb downstream 0.5kb downstream 3220   true scaffold_6: 7460131-7463350 Arabidopsis lyrata
AL6G29090 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 7462851-7463350 Arabidopsis lyrata
AL6G29090 1.0kb upstream 1.0kb upstream 3720   true scaffold_6: 7459131-7462850 Arabidopsis lyrata
AL6G29090 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 7459131-7460130 Arabidopsis lyrata
AL6G29090 1.0kb downstream 1.0kb downstream 3720   true scaffold_6: 7460131-7463850 Arabidopsis lyrata
AL6G29090 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 7462851-7463850 Arabidopsis lyrata
AL6G29090 2.0kb upstream 2.0kb upstream 4720   true scaffold_6: 7458131-7462850 Arabidopsis lyrata
AL6G29090 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 7458131-7460130 Arabidopsis lyrata
AL6G29090 2.0kb downstream 2.0kb downstream 4720   true scaffold_6: 7460131-7464850 Arabidopsis lyrata
AL6G29090 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 7462851-7464850 Arabidopsis lyrata
AL6G29090 5.0kb upstream 5.0kb upstream 7720   true scaffold_6: 7455131-7462850 Arabidopsis lyrata
AL6G29090 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 7455131-7460130 Arabidopsis lyrata
AL6G29090 5.0kb downstream 5.0kb downstream 7720   true scaffold_6: 7460131-7467850 Arabidopsis lyrata
AL6G29090 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 7462851-7467850 Arabidopsis lyrata
AL6G29090 10.0kb upstream 10.0kb upstream 12720   true scaffold_6: 7450131-7462850 Arabidopsis lyrata
AL6G29090 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 7450131-7460130 Arabidopsis lyrata
AL6G29090 10.0kb downstream 10.0kb downstream 12720   true scaffold_6: 7460131-7472850 Arabidopsis lyrata
AL6G29090 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 7462851-7472850 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363791 5261 Brassicaceae View MSA
123839950 5264 Brassicales-Malvales View MSA
124345413 5266 SBM View MSA
124243489 5268 Malvidae View MSA
124063634 5270 Rosid View MSA
123740526 5271 Pentapetalae View MSA
122797383 5272 Eudicot View MSA
122046938 5273 Angiosperm View MSA
121344269 5274 Embryophyte View MSA
123424710 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain