Gene : AL6G28500 A. lyrata v2.1

Defline:  (1 of 1) PTHR32467:SF8 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM Genomic Order:  1749
Name:  ? AL6G28500 Secondary Identifier:  ? PAC:35928647

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G28500 0.5kb upstream 0.5kb upstream 3954   true scaffold_6: 7201484-7205437 Arabidopsis lyrata
AL6G28500 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 7204938-7205437 Arabidopsis lyrata
AL6G28500 0.5kb downstream 0.5kb downstream 3954   true scaffold_6: 7200984-7204937 Arabidopsis lyrata
AL6G28500 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 7200984-7201483 Arabidopsis lyrata
AL6G28500 1.0kb upstream 1.0kb upstream 4454   true scaffold_6: 7201484-7205937 Arabidopsis lyrata
AL6G28500 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 7204938-7205937 Arabidopsis lyrata
AL6G28500 1.0kb downstream 1.0kb downstream 4454   true scaffold_6: 7200484-7204937 Arabidopsis lyrata
AL6G28500 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 7200484-7201483 Arabidopsis lyrata
AL6G28500 2.0kb upstream 2.0kb upstream 5454   true scaffold_6: 7201484-7206937 Arabidopsis lyrata
AL6G28500 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 7204938-7206937 Arabidopsis lyrata
AL6G28500 2.0kb downstream 2.0kb downstream 5454   true scaffold_6: 7199484-7204937 Arabidopsis lyrata
AL6G28500 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 7199484-7201483 Arabidopsis lyrata
AL6G28500 5.0kb upstream 5.0kb upstream 8454   true scaffold_6: 7201484-7209937 Arabidopsis lyrata
AL6G28500 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 7204938-7209937 Arabidopsis lyrata
AL6G28500 5.0kb downstream 5.0kb downstream 8454   true scaffold_6: 7196484-7204937 Arabidopsis lyrata
AL6G28500 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 7196484-7201483 Arabidopsis lyrata
AL6G28500 10.0kb upstream 10.0kb upstream 13454   true scaffold_6: 7201484-7214937 Arabidopsis lyrata
AL6G28500 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 7204938-7214937 Arabidopsis lyrata
AL6G28500 10.0kb downstream 10.0kb downstream 13454   true scaffold_6: 7191484-7204937 Arabidopsis lyrata
AL6G28500 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 7191484-7201483 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041266 5273 Angiosperm View MSA
122368316 5261 Brassicaceae View MSA
123829352 5264 Brassicales-Malvales View MSA
124340297 5266 SBM View MSA
124247741 5268 Malvidae View MSA
124065940 5270 Rosid View MSA
123744753 5271 Pentapetalae View MSA
122796113 5272 Eudicot View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain