Gene : AL6G27130 A. lyrata v2.1

Defline:  (1 of 2) PTHR31155:SF4 - ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 1, CHLOROPLASTIC-RELATED Genomic Order:  1619
Name:  ? AL6G27130 Secondary Identifier:  ? PAC:35928539

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5147 Arabidopsis lyrata pathologic  
Alyrata PWY-5156 Arabidopsis lyrata pathologic  
Alyrata PWY-5366 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G27130 0.5kb upstream 0.5kb upstream 3466   true scaffold_6: 6629261-6632726 Arabidopsis lyrata
AL6G27130 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 6629261-6629760 Arabidopsis lyrata
AL6G27130 0.5kb downstream 0.5kb downstream 3466   true scaffold_6: 6629761-6633226 Arabidopsis lyrata
AL6G27130 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 6632727-6633226 Arabidopsis lyrata
AL6G27130 1.0kb upstream 1.0kb upstream 3966   true scaffold_6: 6628761-6632726 Arabidopsis lyrata
AL6G27130 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 6628761-6629760 Arabidopsis lyrata
AL6G27130 1.0kb downstream 1.0kb downstream 3966   true scaffold_6: 6629761-6633726 Arabidopsis lyrata
AL6G27130 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 6632727-6633726 Arabidopsis lyrata
AL6G27130 2.0kb upstream 2.0kb upstream 4966   true scaffold_6: 6627761-6632726 Arabidopsis lyrata
AL6G27130 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 6627761-6629760 Arabidopsis lyrata
AL6G27130 2.0kb downstream 2.0kb downstream 4966   true scaffold_6: 6629761-6634726 Arabidopsis lyrata
AL6G27130 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 6632727-6634726 Arabidopsis lyrata
AL6G27130 5.0kb upstream 5.0kb upstream 7966   true scaffold_6: 6624761-6632726 Arabidopsis lyrata
AL6G27130 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 6624761-6629760 Arabidopsis lyrata
AL6G27130 5.0kb downstream 5.0kb downstream 7966   true scaffold_6: 6629761-6637726 Arabidopsis lyrata
AL6G27130 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 6632727-6637726 Arabidopsis lyrata
AL6G27130 10.0kb upstream 10.0kb upstream 12966   true scaffold_6: 6619761-6632726 Arabidopsis lyrata
AL6G27130 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 6619761-6629760 Arabidopsis lyrata
AL6G27130 10.0kb downstream 10.0kb downstream 12966   true scaffold_6: 6629761-6642726 Arabidopsis lyrata
AL6G27130 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 6632727-6642726 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510829 5273 Angiosperm View MSA
122368709 5261 Brassicaceae View MSA
123799636 5264 Brassicales-Malvales View MSA
124297136 5266 SBM View MSA
124149102 5268 Malvidae View MSA
123874975 5270 Rosid View MSA
123458870 5271 Pentapetalae View MSA
122494268 5272 Eudicot View MSA
120783905 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain