Gene : AL6G27320 A. lyrata v2.1

Defline:  (1 of 1) PTHR23151:SF66 - BIOTIN CARBOXYL CARRIER PROTEIN OF ACETYL-COA CARBOXYLASE 1, CHLOROPLASTIC Genomic Order:  1636
Name:  ? AL6G27320 Secondary Identifier:  ? PAC:35929241

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-1264 Arabidopsis lyrata pathologic  
Alyrata PWY-4381 Arabidopsis lyrata pathologic  
Alyrata PWY-5156 Arabidopsis lyrata pathologic  
Alyrata PWY-7388 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G27320 0.5kb upstream 0.5kb upstream 2897   true scaffold_6: 6690640-6693536 Arabidopsis lyrata
AL6G27320 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 6693037-6693536 Arabidopsis lyrata
AL6G27320 0.5kb downstream 0.5kb downstream 2897   true scaffold_6: 6690140-6693036 Arabidopsis lyrata
AL6G27320 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 6690140-6690639 Arabidopsis lyrata
AL6G27320 1.0kb upstream 1.0kb upstream 3397   true scaffold_6: 6690640-6694036 Arabidopsis lyrata
AL6G27320 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 6693037-6694036 Arabidopsis lyrata
AL6G27320 1.0kb downstream 1.0kb downstream 3397   true scaffold_6: 6689640-6693036 Arabidopsis lyrata
AL6G27320 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 6689640-6690639 Arabidopsis lyrata
AL6G27320 2.0kb upstream 2.0kb upstream 4397   true scaffold_6: 6690640-6695036 Arabidopsis lyrata
AL6G27320 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 6693037-6695036 Arabidopsis lyrata
AL6G27320 2.0kb downstream 2.0kb downstream 4397   true scaffold_6: 6688640-6693036 Arabidopsis lyrata
AL6G27320 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 6688640-6690639 Arabidopsis lyrata
AL6G27320 5.0kb upstream 5.0kb upstream 7397   true scaffold_6: 6690640-6698036 Arabidopsis lyrata
AL6G27320 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 6693037-6698036 Arabidopsis lyrata
AL6G27320 5.0kb downstream 5.0kb downstream 7397   true scaffold_6: 6685640-6693036 Arabidopsis lyrata
AL6G27320 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 6685640-6690639 Arabidopsis lyrata
AL6G27320 10.0kb upstream 10.0kb upstream 12397   true scaffold_6: 6690640-6703036 Arabidopsis lyrata
AL6G27320 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 6693037-6703036 Arabidopsis lyrata
AL6G27320 10.0kb downstream 10.0kb downstream 12397   true scaffold_6: 6680640-6693036 Arabidopsis lyrata
AL6G27320 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 6680640-6690639 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376036 5261 Brassicaceae View MSA
123841026 5264 Brassicales-Malvales View MSA
124342707 5266 SBM View MSA
124244588 5268 Malvidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain