Gene : AL6G26830 A. lyrata v2.1

Defline:  (1 of 2) 4.1.1.18 - Lysine decarboxylase / L-lysine carboxy-lyase Genomic Order:  1592
Name:  ? AL6G26830 Secondary Identifier:  ? PAC:35926417

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ARGSPECAT-PWY Arabidopsis lyrata pathologic  
Alyrata BSUBPOLYAMSYN-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-7528 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G26830 0.5kb upstream 0.5kb upstream 2564   true scaffold_6: 6502627-6505190 Arabidopsis lyrata
AL6G26830 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 6502627-6503126 Arabidopsis lyrata
AL6G26830 0.5kb downstream 0.5kb downstream 2564   true scaffold_6: 6503127-6505690 Arabidopsis lyrata
AL6G26830 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 6505191-6505690 Arabidopsis lyrata
AL6G26830 1.0kb upstream 1.0kb upstream 3064   true scaffold_6: 6502127-6505190 Arabidopsis lyrata
AL6G26830 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 6502127-6503126 Arabidopsis lyrata
AL6G26830 1.0kb downstream 1.0kb downstream 3064   true scaffold_6: 6503127-6506190 Arabidopsis lyrata
AL6G26830 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 6505191-6506190 Arabidopsis lyrata
AL6G26830 2.0kb upstream 2.0kb upstream 4064   true scaffold_6: 6501127-6505190 Arabidopsis lyrata
AL6G26830 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 6501127-6503126 Arabidopsis lyrata
AL6G26830 2.0kb downstream 2.0kb downstream 4064   true scaffold_6: 6503127-6507190 Arabidopsis lyrata
AL6G26830 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 6505191-6507190 Arabidopsis lyrata
AL6G26830 5.0kb upstream 5.0kb upstream 7064   true scaffold_6: 6498127-6505190 Arabidopsis lyrata
AL6G26830 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 6498127-6503126 Arabidopsis lyrata
AL6G26830 5.0kb downstream 5.0kb downstream 7064   true scaffold_6: 6503127-6510190 Arabidopsis lyrata
AL6G26830 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 6505191-6510190 Arabidopsis lyrata
AL6G26830 10.0kb upstream 10.0kb upstream 12064   true scaffold_6: 6493127-6505190 Arabidopsis lyrata
AL6G26830 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 6493127-6503126 Arabidopsis lyrata
AL6G26830 10.0kb downstream 10.0kb downstream 12064   true scaffold_6: 6503127-6515190 Arabidopsis lyrata
AL6G26830 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 6505191-6515190 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369621 5261 Brassicaceae View MSA
123841428 5264 Brassicales-Malvales View MSA
124346938 5266 SBM View MSA
124250445 5268 Malvidae View MSA
124073000 5270 Rosid View MSA
123746333 5271 Pentapetalae View MSA
122785858 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain