Gene : AL6G26800 A. lyrata v2.1

Defline:  (1 of 1) PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 Genomic Order:  1589
Name:  ? AL6G26800 Secondary Identifier:  ? PAC:35927390

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G26800 0.5kb upstream 0.5kb upstream 4616   true scaffold_6: 6492357-6496972 Arabidopsis lyrata
AL6G26800 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 6492357-6492856 Arabidopsis lyrata
AL6G26800 0.5kb downstream 0.5kb downstream 4616   true scaffold_6: 6492857-6497472 Arabidopsis lyrata
AL6G26800 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 6496973-6497472 Arabidopsis lyrata
AL6G26800 1.0kb upstream 1.0kb upstream 5116   true scaffold_6: 6491857-6496972 Arabidopsis lyrata
AL6G26800 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 6491857-6492856 Arabidopsis lyrata
AL6G26800 1.0kb downstream 1.0kb downstream 5116   true scaffold_6: 6492857-6497972 Arabidopsis lyrata
AL6G26800 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 6496973-6497972 Arabidopsis lyrata
AL6G26800 2.0kb upstream 2.0kb upstream 6116   true scaffold_6: 6490857-6496972 Arabidopsis lyrata
AL6G26800 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 6490857-6492856 Arabidopsis lyrata
AL6G26800 2.0kb downstream 2.0kb downstream 6116   true scaffold_6: 6492857-6498972 Arabidopsis lyrata
AL6G26800 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 6496973-6498972 Arabidopsis lyrata
AL6G26800 5.0kb upstream 5.0kb upstream 9116   true scaffold_6: 6487857-6496972 Arabidopsis lyrata
AL6G26800 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 6487857-6492856 Arabidopsis lyrata
AL6G26800 5.0kb downstream 5.0kb downstream 9116   true scaffold_6: 6492857-6501972 Arabidopsis lyrata
AL6G26800 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 6496973-6501972 Arabidopsis lyrata
AL6G26800 10.0kb upstream 10.0kb upstream 14116   true scaffold_6: 6482857-6496972 Arabidopsis lyrata
AL6G26800 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 6482857-6492856 Arabidopsis lyrata
AL6G26800 10.0kb downstream 10.0kb downstream 14116   true scaffold_6: 6492857-6506972 Arabidopsis lyrata
AL6G26800 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 6496973-6506972 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363583 5261 Brassicaceae View MSA
123833026 5264 Brassicales-Malvales View MSA
124338779 5266 SBM View MSA
124241301 5268 Malvidae View MSA
124065348 5270 Rosid View MSA
123736538 5271 Pentapetalae View MSA
122789208 5272 Eudicot View MSA
122042538 5273 Angiosperm View MSA
121345004 5274 Embryophyte View MSA
123424617 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain