Gene : AL6G27020 A. lyrata v2.1
Defline:  (1 of 2) PTHR17224:SF3 - CHLOROPLASTIC GROUP IIB INTRON SPLICING FACILITATOR CRS2-A, CHLOROPLASTIC-RELATED Genomic Order:  1610
Name:  ? AL6G27020 Secondary Identifier:  ? PAC:35928562
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G27020 0.5kb upstream 0.5kb upstream 2419   true scaffold_6: 6589088-6591506 Arabidopsis lyrata
AL6G27020 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 6591007-6591506 Arabidopsis lyrata
AL6G27020 0.5kb downstream 0.5kb downstream 2419   true scaffold_6: 6588588-6591006 Arabidopsis lyrata
AL6G27020 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 6588588-6589087 Arabidopsis lyrata
AL6G27020 1.0kb upstream 1.0kb upstream 2919   true scaffold_6: 6589088-6592006 Arabidopsis lyrata
AL6G27020 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 6591007-6592006 Arabidopsis lyrata
AL6G27020 1.0kb downstream 1.0kb downstream 2919   true scaffold_6: 6588088-6591006 Arabidopsis lyrata
AL6G27020 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 6588088-6589087 Arabidopsis lyrata
AL6G27020 2.0kb upstream 2.0kb upstream 3919   true scaffold_6: 6589088-6593006 Arabidopsis lyrata
AL6G27020 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 6591007-6593006 Arabidopsis lyrata
AL6G27020 2.0kb downstream 2.0kb downstream 3919   true scaffold_6: 6587088-6591006 Arabidopsis lyrata
AL6G27020 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 6587088-6589087 Arabidopsis lyrata
AL6G27020 5.0kb upstream 5.0kb upstream 6919   true scaffold_6: 6589088-6596006 Arabidopsis lyrata
AL6G27020 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 6591007-6596006 Arabidopsis lyrata
AL6G27020 5.0kb downstream 5.0kb downstream 6919   true scaffold_6: 6584088-6591006 Arabidopsis lyrata
AL6G27020 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 6584088-6589087 Arabidopsis lyrata
AL6G27020 10.0kb upstream 10.0kb upstream 11919   true scaffold_6: 6589088-6601006 Arabidopsis lyrata
AL6G27020 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 6591007-6601006 Arabidopsis lyrata
AL6G27020 10.0kb downstream 10.0kb downstream 11919   true scaffold_6: 6579088-6591006 Arabidopsis lyrata
AL6G27020 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 6579088-6589087 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369822 5261 Brassicaceae View MSA
123836540 5264 Brassicales-Malvales View MSA
124336463 5266 SBM View MSA
124238941 5268 Malvidae View MSA
124065240 5270 Rosid View MSA
123737233 5271 Pentapetalae View MSA
122785748 5272 Eudicot View MSA
122047597 5273 Angiosperm View MSA
121310770 5274 Embryophyte View MSA
123426354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain