Gene : AL6G27890 A. lyrata v2.1
Defline:  (1 of 2) PTHR13856//PTHR13856:SF93 - VHS DOMAIN CONTAINING PROTEIN FAMILY // SUBFAMILY NOT NAMED Genomic Order:  1691
Name:  ? AL6G27890 Secondary Identifier:  ? PAC:35929079
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G27890 0.5kb upstream 0.5kb upstream 2992   true scaffold_6: 6933462-6936453 Arabidopsis lyrata
AL6G27890 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 6933462-6933961 Arabidopsis lyrata
AL6G27890 0.5kb downstream 0.5kb downstream 2992   true scaffold_6: 6933962-6936953 Arabidopsis lyrata
AL6G27890 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 6936454-6936953 Arabidopsis lyrata
AL6G27890 1.0kb upstream 1.0kb upstream 3492   true scaffold_6: 6932962-6936453 Arabidopsis lyrata
AL6G27890 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 6932962-6933961 Arabidopsis lyrata
AL6G27890 1.0kb downstream 1.0kb downstream 3492   true scaffold_6: 6933962-6937453 Arabidopsis lyrata
AL6G27890 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 6936454-6937453 Arabidopsis lyrata
AL6G27890 2.0kb upstream 2.0kb upstream 4492   true scaffold_6: 6931962-6936453 Arabidopsis lyrata
AL6G27890 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 6931962-6933961 Arabidopsis lyrata
AL6G27890 2.0kb downstream 2.0kb downstream 4492   true scaffold_6: 6933962-6938453 Arabidopsis lyrata
AL6G27890 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 6936454-6938453 Arabidopsis lyrata
AL6G27890 5.0kb upstream 5.0kb upstream 7492   true scaffold_6: 6928962-6936453 Arabidopsis lyrata
AL6G27890 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 6928962-6933961 Arabidopsis lyrata
AL6G27890 5.0kb downstream 5.0kb downstream 7492   true scaffold_6: 6933962-6941453 Arabidopsis lyrata
AL6G27890 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 6936454-6941453 Arabidopsis lyrata
AL6G27890 10.0kb upstream 10.0kb upstream 12492   true scaffold_6: 6923962-6936453 Arabidopsis lyrata
AL6G27890 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 6923962-6933961 Arabidopsis lyrata
AL6G27890 10.0kb downstream 10.0kb downstream 12492   true scaffold_6: 6933962-6946453 Arabidopsis lyrata
AL6G27890 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 6936454-6946453 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360210 5261 Brassicaceae View MSA
123833666 5264 Brassicales-Malvales View MSA
124340636 5266 SBM View MSA
124239478 5268 Malvidae View MSA
124062688 5270 Rosid View MSA
123746960 5271 Pentapetalae View MSA
122785601 5272 Eudicot View MSA
122046025 5273 Angiosperm View MSA
121345678 5274 Embryophyte View MSA
123380253 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain