Gene : AL6G27800 A. lyrata v2.1
Defline:  (1 of 2) K11984 - U4/U6.U5 tri-snRNP-associated protein 1 (SART1, HAF, SNU66) Genomic Order:  1682
Name:  ? AL6G27800 Secondary Identifier:  ? PAC:35928709
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G27800 0.5kb upstream 0.5kb upstream 5159   true scaffold_6: 6897059-6902217 Arabidopsis lyrata
AL6G27800 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 6901718-6902217 Arabidopsis lyrata
AL6G27800 0.5kb downstream 0.5kb downstream 5159   true scaffold_6: 6896559-6901717 Arabidopsis lyrata
AL6G27800 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 6896559-6897058 Arabidopsis lyrata
AL6G27800 1.0kb upstream 1.0kb upstream 5659   true scaffold_6: 6897059-6902717 Arabidopsis lyrata
AL6G27800 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 6901718-6902717 Arabidopsis lyrata
AL6G27800 1.0kb downstream 1.0kb downstream 5659   true scaffold_6: 6896059-6901717 Arabidopsis lyrata
AL6G27800 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 6896059-6897058 Arabidopsis lyrata
AL6G27800 2.0kb upstream 2.0kb upstream 6659   true scaffold_6: 6897059-6903717 Arabidopsis lyrata
AL6G27800 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 6901718-6903717 Arabidopsis lyrata
AL6G27800 2.0kb downstream 2.0kb downstream 6659   true scaffold_6: 6895059-6901717 Arabidopsis lyrata
AL6G27800 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 6895059-6897058 Arabidopsis lyrata
AL6G27800 5.0kb upstream 5.0kb upstream 9659   true scaffold_6: 6897059-6906717 Arabidopsis lyrata
AL6G27800 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 6901718-6906717 Arabidopsis lyrata
AL6G27800 5.0kb downstream 5.0kb downstream 9659   true scaffold_6: 6892059-6901717 Arabidopsis lyrata
AL6G27800 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 6892059-6897058 Arabidopsis lyrata
AL6G27800 10.0kb upstream 10.0kb upstream 14659   true scaffold_6: 6897059-6911717 Arabidopsis lyrata
AL6G27800 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 6901718-6911717 Arabidopsis lyrata
AL6G27800 10.0kb downstream 10.0kb downstream 14659   true scaffold_6: 6887059-6901717 Arabidopsis lyrata
AL6G27800 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 6887059-6897058 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367136 5261 Brassicaceae View MSA
123834168 5264 Brassicales-Malvales View MSA
124342005 5266 SBM View MSA
124238371 5268 Malvidae View MSA
124062674 5270 Rosid View MSA
123746922 5271 Pentapetalae View MSA
122786640 5272 Eudicot View MSA
122041665 5273 Angiosperm View MSA
121345433 5274 Embryophyte View MSA
123424851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain