Gene : AL6G25620 A. lyrata v2.1

Defline:  (1 of 1) K05286 - phosphatidylinositol glycan, class B (PIGB) Genomic Order:  1473
Name:  ? AL6G25620 Secondary Identifier:  ? PAC:35926121

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G25620 0.5kb upstream 0.5kb upstream 3556   true scaffold_6: 6021559-6025114 Arabidopsis lyrata
AL6G25620 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 6024615-6025114 Arabidopsis lyrata
AL6G25620 0.5kb downstream 0.5kb downstream 3556   true scaffold_6: 6021059-6024614 Arabidopsis lyrata
AL6G25620 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 6021059-6021558 Arabidopsis lyrata
AL6G25620 1.0kb upstream 1.0kb upstream 4056   true scaffold_6: 6021559-6025614 Arabidopsis lyrata
AL6G25620 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 6024615-6025614 Arabidopsis lyrata
AL6G25620 1.0kb downstream 1.0kb downstream 4056   true scaffold_6: 6020559-6024614 Arabidopsis lyrata
AL6G25620 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 6020559-6021558 Arabidopsis lyrata
AL6G25620 2.0kb upstream 2.0kb upstream 5056   true scaffold_6: 6021559-6026614 Arabidopsis lyrata
AL6G25620 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 6024615-6026614 Arabidopsis lyrata
AL6G25620 2.0kb downstream 2.0kb downstream 5056   true scaffold_6: 6019559-6024614 Arabidopsis lyrata
AL6G25620 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 6019559-6021558 Arabidopsis lyrata
AL6G25620 5.0kb upstream 5.0kb upstream 8056   true scaffold_6: 6021559-6029614 Arabidopsis lyrata
AL6G25620 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 6024615-6029614 Arabidopsis lyrata
AL6G25620 5.0kb downstream 5.0kb downstream 8056   true scaffold_6: 6016559-6024614 Arabidopsis lyrata
AL6G25620 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 6016559-6021558 Arabidopsis lyrata
AL6G25620 10.0kb upstream 10.0kb upstream 13056   true scaffold_6: 6021559-6034614 Arabidopsis lyrata
AL6G25620 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 6024615-6034614 Arabidopsis lyrata
AL6G25620 10.0kb downstream 10.0kb downstream 13056   true scaffold_6: 6011559-6024614 Arabidopsis lyrata
AL6G25620 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 6011559-6021558 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366815 5261 Brassicaceae View MSA
123833757 5264 Brassicales-Malvales View MSA
124342943 5266 SBM View MSA
124237026 5268 Malvidae View MSA
124065549 5270 Rosid View MSA
123737341 5271 Pentapetalae View MSA
122796897 5272 Eudicot View MSA
122042871 5273 Angiosperm View MSA
121346274 5274 Embryophyte View MSA
123425289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain