Gene : AL6G25560 A. lyrata v2.1

Defline:  (1 of 1) 1.4.3.16 - L-aspartate oxidase / LASPO Genomic Order:  1467
Name:  ? AL6G25560 Secondary Identifier:  ? PAC:35928378

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PYRIDNUCSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G25560 0.5kb upstream 0.5kb upstream 4227   true scaffold_6: 5997499-6001725 Arabidopsis lyrata
AL6G25560 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 5997499-5997998 Arabidopsis lyrata
AL6G25560 0.5kb downstream 0.5kb downstream 4227   true scaffold_6: 5997999-6002225 Arabidopsis lyrata
AL6G25560 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 6001726-6002225 Arabidopsis lyrata
AL6G25560 1.0kb upstream 1.0kb upstream 4727   true scaffold_6: 5996999-6001725 Arabidopsis lyrata
AL6G25560 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 5996999-5997998 Arabidopsis lyrata
AL6G25560 1.0kb downstream 1.0kb downstream 4727   true scaffold_6: 5997999-6002725 Arabidopsis lyrata
AL6G25560 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 6001726-6002725 Arabidopsis lyrata
AL6G25560 2.0kb upstream 2.0kb upstream 5727   true scaffold_6: 5995999-6001725 Arabidopsis lyrata
AL6G25560 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 5995999-5997998 Arabidopsis lyrata
AL6G25560 2.0kb downstream 2.0kb downstream 5727   true scaffold_6: 5997999-6003725 Arabidopsis lyrata
AL6G25560 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 6001726-6003725 Arabidopsis lyrata
AL6G25560 5.0kb upstream 5.0kb upstream 8727   true scaffold_6: 5992999-6001725 Arabidopsis lyrata
AL6G25560 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 5992999-5997998 Arabidopsis lyrata
AL6G25560 5.0kb downstream 5.0kb downstream 8727   true scaffold_6: 5997999-6006725 Arabidopsis lyrata
AL6G25560 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 6001726-6006725 Arabidopsis lyrata
AL6G25560 10.0kb upstream 10.0kb upstream 13727   true scaffold_6: 5987999-6001725 Arabidopsis lyrata
AL6G25560 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 5987999-5997998 Arabidopsis lyrata
AL6G25560 10.0kb downstream 10.0kb downstream 13727   true scaffold_6: 5997999-6011725 Arabidopsis lyrata
AL6G25560 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 6001726-6011725 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362137 5261 Brassicaceae View MSA
123833845 5264 Brassicales-Malvales View MSA
124339867 5266 SBM View MSA
124243494 5268 Malvidae View MSA
124067870 5270 Rosid View MSA
123737542 5271 Pentapetalae View MSA
122792941 5272 Eudicot View MSA
122044025 5273 Angiosperm View MSA
121345783 5274 Embryophyte View MSA
123424759 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain