Gene : AL6G25600 A. lyrata v2.1

Defline:  (1 of 1) 1.5.1.2 - Pyrroline-5-carboxylate reductase / P5CR Genomic Order:  1471
Name:  ? AL6G25600 Secondary Identifier:  ? PAC:35927487

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ARG-PRO-PWY Arabidopsis lyrata pathologic  
Alyrata PROSYN-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-3341 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G25600 0.5kb upstream 0.5kb upstream 1940   true scaffold_6: 6018156-6020095 Arabidopsis lyrata
AL6G25600 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 6019596-6020095 Arabidopsis lyrata
AL6G25600 0.5kb downstream 0.5kb downstream 1940   true scaffold_6: 6017656-6019595 Arabidopsis lyrata
AL6G25600 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 6017656-6018155 Arabidopsis lyrata
AL6G25600 1.0kb upstream 1.0kb upstream 2440   true scaffold_6: 6018156-6020595 Arabidopsis lyrata
AL6G25600 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 6019596-6020595 Arabidopsis lyrata
AL6G25600 1.0kb downstream 1.0kb downstream 2440   true scaffold_6: 6017156-6019595 Arabidopsis lyrata
AL6G25600 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 6017156-6018155 Arabidopsis lyrata
AL6G25600 2.0kb upstream 2.0kb upstream 3440   true scaffold_6: 6018156-6021595 Arabidopsis lyrata
AL6G25600 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 6019596-6021595 Arabidopsis lyrata
AL6G25600 2.0kb downstream 2.0kb downstream 3440   true scaffold_6: 6016156-6019595 Arabidopsis lyrata
AL6G25600 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 6016156-6018155 Arabidopsis lyrata
AL6G25600 5.0kb upstream 5.0kb upstream 6440   true scaffold_6: 6018156-6024595 Arabidopsis lyrata
AL6G25600 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 6019596-6024595 Arabidopsis lyrata
AL6G25600 5.0kb downstream 5.0kb downstream 6440   true scaffold_6: 6013156-6019595 Arabidopsis lyrata
AL6G25600 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 6013156-6018155 Arabidopsis lyrata
AL6G25600 10.0kb upstream 10.0kb upstream 11440   true scaffold_6: 6018156-6029595 Arabidopsis lyrata
AL6G25600 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 6019596-6029595 Arabidopsis lyrata
AL6G25600 10.0kb downstream 10.0kb downstream 11440   true scaffold_6: 6008156-6019595 Arabidopsis lyrata
AL6G25600 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 6008156-6018155 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361924 5261 Brassicaceae View MSA
123837658 5264 Brassicales-Malvales View MSA
124337864 5266 SBM View MSA
124250684 5268 Malvidae View MSA
124061027 5270 Rosid View MSA
123740492 5271 Pentapetalae View MSA
122788937 5272 Eudicot View MSA
122043656 5273 Angiosperm View MSA
123428906 5275 Viridiplantae View MSA
121346927 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain