Gene : AL6G26390 A. lyrata v2.1

Defline:  (1 of 1) PTHR23151//PTHR23151:SF70 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1548
Name:  ? AL6G26390 Secondary Identifier:  ? PAC:35929488

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-1264 Arabidopsis lyrata pathologic  
Alyrata PWY-4381 Arabidopsis lyrata pathologic  
Alyrata PWY-5156 Arabidopsis lyrata pathologic  
Alyrata PWY-7388 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G26390 0.5kb upstream 0.5kb upstream 2955   true scaffold_6: 6322510-6325464 Arabidopsis lyrata
AL6G26390 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 6322510-6323009 Arabidopsis lyrata
AL6G26390 0.5kb downstream 0.5kb downstream 2955   true scaffold_6: 6323010-6325964 Arabidopsis lyrata
AL6G26390 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 6325465-6325964 Arabidopsis lyrata
AL6G26390 1.0kb upstream 1.0kb upstream 3455   true scaffold_6: 6322010-6325464 Arabidopsis lyrata
AL6G26390 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 6322010-6323009 Arabidopsis lyrata
AL6G26390 1.0kb downstream 1.0kb downstream 3455   true scaffold_6: 6323010-6326464 Arabidopsis lyrata
AL6G26390 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 6325465-6326464 Arabidopsis lyrata
AL6G26390 2.0kb upstream 2.0kb upstream 4455   true scaffold_6: 6321010-6325464 Arabidopsis lyrata
AL6G26390 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 6321010-6323009 Arabidopsis lyrata
AL6G26390 2.0kb downstream 2.0kb downstream 4455   true scaffold_6: 6323010-6327464 Arabidopsis lyrata
AL6G26390 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 6325465-6327464 Arabidopsis lyrata
AL6G26390 5.0kb upstream 5.0kb upstream 7455   true scaffold_6: 6318010-6325464 Arabidopsis lyrata
AL6G26390 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 6318010-6323009 Arabidopsis lyrata
AL6G26390 5.0kb downstream 5.0kb downstream 7455   true scaffold_6: 6323010-6330464 Arabidopsis lyrata
AL6G26390 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 6325465-6330464 Arabidopsis lyrata
AL6G26390 10.0kb upstream 10.0kb upstream 12455   true scaffold_6: 6313010-6325464 Arabidopsis lyrata
AL6G26390 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 6313010-6323009 Arabidopsis lyrata
AL6G26390 10.0kb downstream 10.0kb downstream 12455   true scaffold_6: 6323010-6335464 Arabidopsis lyrata
AL6G26390 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 6325465-6335464 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374831 5261 Brassicaceae View MSA
123836808 5264 Brassicales-Malvales View MSA
124350225 5266 SBM View MSA
124244588 5268 Malvidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain