Gene : AL6G25230 A. lyrata v2.1

Defline:  (1 of 2) PTHR31079:SF2 - F4P13.14 PROTEIN-RELATED Genomic Order:  1438
Name:  ? AL6G25230 Secondary Identifier:  ? PAC:35925954

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G25230 0.5kb upstream 0.5kb upstream 3424   true scaffold_6: 5850397-5853820 Arabidopsis lyrata
AL6G25230 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 5853321-5853820 Arabidopsis lyrata
AL6G25230 0.5kb downstream 0.5kb downstream 3424   true scaffold_6: 5849897-5853320 Arabidopsis lyrata
AL6G25230 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 5849897-5850396 Arabidopsis lyrata
AL6G25230 1.0kb upstream 1.0kb upstream 3924   true scaffold_6: 5850397-5854320 Arabidopsis lyrata
AL6G25230 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 5853321-5854320 Arabidopsis lyrata
AL6G25230 1.0kb downstream 1.0kb downstream 3924   true scaffold_6: 5849397-5853320 Arabidopsis lyrata
AL6G25230 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 5849397-5850396 Arabidopsis lyrata
AL6G25230 2.0kb upstream 2.0kb upstream 4924   true scaffold_6: 5850397-5855320 Arabidopsis lyrata
AL6G25230 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 5853321-5855320 Arabidopsis lyrata
AL6G25230 2.0kb downstream 2.0kb downstream 4924   true scaffold_6: 5848397-5853320 Arabidopsis lyrata
AL6G25230 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 5848397-5850396 Arabidopsis lyrata
AL6G25230 5.0kb upstream 5.0kb upstream 7924   true scaffold_6: 5850397-5858320 Arabidopsis lyrata
AL6G25230 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 5853321-5858320 Arabidopsis lyrata
AL6G25230 5.0kb downstream 5.0kb downstream 7924   true scaffold_6: 5845397-5853320 Arabidopsis lyrata
AL6G25230 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 5845397-5850396 Arabidopsis lyrata
AL6G25230 10.0kb upstream 10.0kb upstream 12924   true scaffold_6: 5850397-5863320 Arabidopsis lyrata
AL6G25230 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 5853321-5863320 Arabidopsis lyrata
AL6G25230 10.0kb downstream 10.0kb downstream 12924   true scaffold_6: 5840397-5853320 Arabidopsis lyrata
AL6G25230 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 5840397-5850396 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379266 5261 Brassicaceae View MSA
123802177 5264 Brassicales-Malvales View MSA
124299391 5266 SBM View MSA
124244169 5268 Malvidae View MSA
124050172 5270 Rosid View MSA
123744756 5271 Pentapetalae View MSA
122792957 5272 Eudicot View MSA
122048961 5273 Angiosperm View MSA
121311189 5274 Embryophyte View MSA
123348518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain