Gene : AL6G34570 A. lyrata v2.1

Defline:  (1 of 1) PTHR11404:SF17 - SUPEROXIDE DISMUTASE [FE] 3, CHLOROPLASTIC Genomic Order:  2330
Name:  ? AL6G34570 Secondary Identifier:  ? PAC:35929428

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata DETOX1-PWY Arabidopsis lyrata pathologic  
Alyrata DETOX1-PWY-1 Arabidopsis lyrata pathologic  
Alyrata PWY-6854 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G34570 0.5kb upstream 0.5kb upstream 2474   true scaffold_6: 9983864-9986337 Arabidopsis lyrata
AL6G34570 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 9983864-9984363 Arabidopsis lyrata
AL6G34570 0.5kb downstream 0.5kb downstream 2474   true scaffold_6: 9984364-9986837 Arabidopsis lyrata
AL6G34570 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 9986338-9986837 Arabidopsis lyrata
AL6G34570 1.0kb upstream 1.0kb upstream 2974   true scaffold_6: 9983364-9986337 Arabidopsis lyrata
AL6G34570 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 9983364-9984363 Arabidopsis lyrata
AL6G34570 1.0kb downstream 1.0kb downstream 2974   true scaffold_6: 9984364-9987337 Arabidopsis lyrata
AL6G34570 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 9986338-9987337 Arabidopsis lyrata
AL6G34570 2.0kb upstream 2.0kb upstream 3974   true scaffold_6: 9982364-9986337 Arabidopsis lyrata
AL6G34570 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 9982364-9984363 Arabidopsis lyrata
AL6G34570 2.0kb downstream 2.0kb downstream 3974   true scaffold_6: 9984364-9988337 Arabidopsis lyrata
AL6G34570 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 9986338-9988337 Arabidopsis lyrata
AL6G34570 5.0kb upstream 5.0kb upstream 6974   true scaffold_6: 9979364-9986337 Arabidopsis lyrata
AL6G34570 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 9979364-9984363 Arabidopsis lyrata
AL6G34570 5.0kb downstream 5.0kb downstream 6974   true scaffold_6: 9984364-9991337 Arabidopsis lyrata
AL6G34570 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 9986338-9991337 Arabidopsis lyrata
AL6G34570 10.0kb upstream 10.0kb upstream 11974   true scaffold_6: 9974364-9986337 Arabidopsis lyrata
AL6G34570 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 9974364-9984363 Arabidopsis lyrata
AL6G34570 10.0kb downstream 10.0kb downstream 11974   true scaffold_6: 9984364-9996337 Arabidopsis lyrata
AL6G34570 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 9986338-9996337 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365770 5261 Brassicaceae View MSA
123828230 5264 Brassicales-Malvales View MSA
124345837 5266 SBM View MSA
124242563 5268 Malvidae View MSA
124067465 5270 Rosid View MSA
123740223 5271 Pentapetalae View MSA
122788752 5272 Eudicot View MSA
122044976 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain