Gene : AL6G25360 A. lyrata v2.1

Defline:  (1 of 1) 2.1.1.220 - tRNA (adenine(58)-N(1))-methyltransferase / tRNA m(1)A(58) methyltransferase Genomic Order:  1448
Name:  ? AL6G25360 Secondary Identifier:  ? PAC:35926066

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6829 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G25360 0.5kb upstream 0.5kb upstream 2759   true scaffold_6: 5892165-5894923 Arabidopsis lyrata
AL6G25360 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 5892165-5892664 Arabidopsis lyrata
AL6G25360 0.5kb downstream 0.5kb downstream 2759   true scaffold_6: 5892665-5895423 Arabidopsis lyrata
AL6G25360 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 5894924-5895423 Arabidopsis lyrata
AL6G25360 1.0kb upstream 1.0kb upstream 3259   true scaffold_6: 5891665-5894923 Arabidopsis lyrata
AL6G25360 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 5891665-5892664 Arabidopsis lyrata
AL6G25360 1.0kb downstream 1.0kb downstream 3259   true scaffold_6: 5892665-5895923 Arabidopsis lyrata
AL6G25360 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 5894924-5895923 Arabidopsis lyrata
AL6G25360 2.0kb upstream 2.0kb upstream 4259   true scaffold_6: 5890665-5894923 Arabidopsis lyrata
AL6G25360 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 5890665-5892664 Arabidopsis lyrata
AL6G25360 2.0kb downstream 2.0kb downstream 4259   true scaffold_6: 5892665-5896923 Arabidopsis lyrata
AL6G25360 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 5894924-5896923 Arabidopsis lyrata
AL6G25360 5.0kb upstream 5.0kb upstream 7259   true scaffold_6: 5887665-5894923 Arabidopsis lyrata
AL6G25360 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 5887665-5892664 Arabidopsis lyrata
AL6G25360 5.0kb downstream 5.0kb downstream 7259   true scaffold_6: 5892665-5899923 Arabidopsis lyrata
AL6G25360 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 5894924-5899923 Arabidopsis lyrata
AL6G25360 10.0kb upstream 10.0kb upstream 12259   true scaffold_6: 5882665-5894923 Arabidopsis lyrata
AL6G25360 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 5882665-5892664 Arabidopsis lyrata
AL6G25360 10.0kb downstream 10.0kb downstream 12259   true scaffold_6: 5892665-5904923 Arabidopsis lyrata
AL6G25360 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 5894924-5904923 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365982 5261 Brassicaceae View MSA
123833915 5264 Brassicales-Malvales View MSA
124342887 5266 SBM View MSA
124239555 5268 Malvidae View MSA
124067339 5270 Rosid View MSA
123740177 5271 Pentapetalae View MSA
122793445 5272 Eudicot View MSA
122045272 5273 Angiosperm View MSA
121345508 5274 Embryophyte View MSA
123423922 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain