Gene : AL6G23400 A. lyrata v2.1

Defline:  (1 of 1) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Genomic Order:  1263
Name:  ? AL6G23400 Secondary Identifier:  ? PAC:35926849

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G23400 0.5kb upstream 0.5kb upstream 3924   true scaffold_6: 5123523-5127446 Arabidopsis lyrata
AL6G23400 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 5123523-5124022 Arabidopsis lyrata
AL6G23400 0.5kb downstream 0.5kb downstream 3924   true scaffold_6: 5124023-5127946 Arabidopsis lyrata
AL6G23400 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 5127447-5127946 Arabidopsis lyrata
AL6G23400 1.0kb upstream 1.0kb upstream 4424   true scaffold_6: 5123023-5127446 Arabidopsis lyrata
AL6G23400 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 5123023-5124022 Arabidopsis lyrata
AL6G23400 1.0kb downstream 1.0kb downstream 4424   true scaffold_6: 5124023-5128446 Arabidopsis lyrata
AL6G23400 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 5127447-5128446 Arabidopsis lyrata
AL6G23400 2.0kb upstream 2.0kb upstream 5424   true scaffold_6: 5122023-5127446 Arabidopsis lyrata
AL6G23400 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 5122023-5124022 Arabidopsis lyrata
AL6G23400 2.0kb downstream 2.0kb downstream 5424   true scaffold_6: 5124023-5129446 Arabidopsis lyrata
AL6G23400 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 5127447-5129446 Arabidopsis lyrata
AL6G23400 5.0kb upstream 5.0kb upstream 8424   true scaffold_6: 5119023-5127446 Arabidopsis lyrata
AL6G23400 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 5119023-5124022 Arabidopsis lyrata
AL6G23400 5.0kb downstream 5.0kb downstream 8424   true scaffold_6: 5124023-5132446 Arabidopsis lyrata
AL6G23400 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 5127447-5132446 Arabidopsis lyrata
AL6G23400 10.0kb upstream 10.0kb upstream 13424   true scaffold_6: 5114023-5127446 Arabidopsis lyrata
AL6G23400 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 5114023-5124022 Arabidopsis lyrata
AL6G23400 10.0kb downstream 10.0kb downstream 13424   true scaffold_6: 5124023-5137446 Arabidopsis lyrata
AL6G23400 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 5127447-5137446 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027558 5273 Angiosperm View MSA
122372240 5261 Brassicaceae View MSA
123800324 5264 Brassicales-Malvales View MSA
124297748 5266 SBM View MSA
124149560 5268 Malvidae View MSA
123875346 5270 Rosid View MSA
123750117 5271 Pentapetalae View MSA
122773480 5272 Eudicot View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain