Gene : AL6G24210 A. lyrata v2.1

Defline:  (1 of 24) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  1343
Name:  ? AL6G24210 Secondary Identifier:  ? PAC:35929704

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G24210 0.5kb upstream 0.5kb upstream 2818   true scaffold_6: 5488902-5491719 Arabidopsis lyrata
AL6G24210 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 5488902-5489401 Arabidopsis lyrata
AL6G24210 0.5kb downstream 0.5kb downstream 2818   true scaffold_6: 5489402-5492219 Arabidopsis lyrata
AL6G24210 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 5491720-5492219 Arabidopsis lyrata
AL6G24210 1.0kb upstream 1.0kb upstream 3318   true scaffold_6: 5488402-5491719 Arabidopsis lyrata
AL6G24210 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 5488402-5489401 Arabidopsis lyrata
AL6G24210 1.0kb downstream 1.0kb downstream 3318   true scaffold_6: 5489402-5492719 Arabidopsis lyrata
AL6G24210 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 5491720-5492719 Arabidopsis lyrata
AL6G24210 2.0kb upstream 2.0kb upstream 4318   true scaffold_6: 5487402-5491719 Arabidopsis lyrata
AL6G24210 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 5487402-5489401 Arabidopsis lyrata
AL6G24210 2.0kb downstream 2.0kb downstream 4318   true scaffold_6: 5489402-5493719 Arabidopsis lyrata
AL6G24210 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 5491720-5493719 Arabidopsis lyrata
AL6G24210 5.0kb upstream 5.0kb upstream 7318   true scaffold_6: 5484402-5491719 Arabidopsis lyrata
AL6G24210 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 5484402-5489401 Arabidopsis lyrata
AL6G24210 5.0kb downstream 5.0kb downstream 7318   true scaffold_6: 5489402-5496719 Arabidopsis lyrata
AL6G24210 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 5491720-5496719 Arabidopsis lyrata
AL6G24210 10.0kb upstream 10.0kb upstream 12318   true scaffold_6: 5479402-5491719 Arabidopsis lyrata
AL6G24210 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 5479402-5489401 Arabidopsis lyrata
AL6G24210 10.0kb downstream 10.0kb downstream 12318   true scaffold_6: 5489402-5501719 Arabidopsis lyrata
AL6G24210 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 5491720-5501719 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362959 5261 Brassicaceae View MSA
123798459 5264 Brassicales-Malvales View MSA
124296091 5266 SBM View MSA
124148348 5268 Malvidae View MSA
124071972 5270 Rosid View MSA
123743168 5271 Pentapetalae View MSA
122791271 5272 Eudicot View MSA
122050644 5273 Angiosperm View MSA
121312043 5274 Embryophyte View MSA
123349254 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain