Gene : AL6G22990 A. lyrata v2.1

Defline:  (1 of 1) 3.5.2.2 - Dihydropyrimidinase / Hydantoinase Genomic Order:  1224
Name:  ? AL6G22990 Secondary Identifier:  ? PAC:35925883

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3982 Arabidopsis lyrata pathologic  
Alyrata PWY-6430 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G22990 0.5kb upstream 0.5kb upstream 3775   true scaffold_6: 4950742-4954516 Arabidopsis lyrata
AL6G22990 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 4954017-4954516 Arabidopsis lyrata
AL6G22990 0.5kb downstream 0.5kb downstream 3775   true scaffold_6: 4950242-4954016 Arabidopsis lyrata
AL6G22990 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 4950242-4950741 Arabidopsis lyrata
AL6G22990 1.0kb upstream 1.0kb upstream 4275   true scaffold_6: 4950742-4955016 Arabidopsis lyrata
AL6G22990 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 4954017-4955016 Arabidopsis lyrata
AL6G22990 1.0kb downstream 1.0kb downstream 4275   true scaffold_6: 4949742-4954016 Arabidopsis lyrata
AL6G22990 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 4949742-4950741 Arabidopsis lyrata
AL6G22990 2.0kb upstream 2.0kb upstream 5275   true scaffold_6: 4950742-4956016 Arabidopsis lyrata
AL6G22990 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 4954017-4956016 Arabidopsis lyrata
AL6G22990 2.0kb downstream 2.0kb downstream 5275   true scaffold_6: 4948742-4954016 Arabidopsis lyrata
AL6G22990 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 4948742-4950741 Arabidopsis lyrata
AL6G22990 5.0kb upstream 5.0kb upstream 8275   true scaffold_6: 4950742-4959016 Arabidopsis lyrata
AL6G22990 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 4954017-4959016 Arabidopsis lyrata
AL6G22990 5.0kb downstream 5.0kb downstream 8275   true scaffold_6: 4945742-4954016 Arabidopsis lyrata
AL6G22990 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 4945742-4950741 Arabidopsis lyrata
AL6G22990 10.0kb upstream 10.0kb upstream 13275   true scaffold_6: 4950742-4964016 Arabidopsis lyrata
AL6G22990 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 4954017-4964016 Arabidopsis lyrata
AL6G22990 10.0kb downstream 10.0kb downstream 13275   true scaffold_6: 4940742-4954016 Arabidopsis lyrata
AL6G22990 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 4940742-4950741 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369486 5261 Brassicaceae View MSA
123828223 5264 Brassicales-Malvales View MSA
124341067 5266 SBM View MSA
124243285 5268 Malvidae View MSA
124064802 5270 Rosid View MSA
123752945 5271 Pentapetalae View MSA
122786753 5272 Eudicot View MSA
122045027 5273 Angiosperm View MSA
121345970 5274 Embryophyte View MSA
123425044 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain