Gene : AL6G42740 A. lyrata v2.1

Defline:  (1 of 2) K03023 - DNA-directed RNA polymerase III subunit RPC3 (RPC3, POLR3C) Genomic Order:  3033
Name:  ? AL6G42740 Secondary Identifier:  ? PAC:35928181

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G42740 0.5kb upstream 0.5kb upstream 3675   true scaffold_6: 19076815-19080489 Arabidopsis lyrata
AL6G42740 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 19076815-19077314 Arabidopsis lyrata
AL6G42740 0.5kb downstream 0.5kb downstream 3675   true scaffold_6: 19077315-19080989 Arabidopsis lyrata
AL6G42740 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 19080490-19080989 Arabidopsis lyrata
AL6G42740 1.0kb upstream 1.0kb upstream 4175   true scaffold_6: 19076315-19080489 Arabidopsis lyrata
AL6G42740 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 19076315-19077314 Arabidopsis lyrata
AL6G42740 1.0kb downstream 1.0kb downstream 4175   true scaffold_6: 19077315-19081489 Arabidopsis lyrata
AL6G42740 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 19080490-19081489 Arabidopsis lyrata
AL6G42740 2.0kb upstream 2.0kb upstream 5175   true scaffold_6: 19075315-19080489 Arabidopsis lyrata
AL6G42740 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 19075315-19077314 Arabidopsis lyrata
AL6G42740 2.0kb downstream 2.0kb downstream 5175   true scaffold_6: 19077315-19082489 Arabidopsis lyrata
AL6G42740 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 19080490-19082489 Arabidopsis lyrata
AL6G42740 5.0kb upstream 5.0kb upstream 8175   true scaffold_6: 19072315-19080489 Arabidopsis lyrata
AL6G42740 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 19072315-19077314 Arabidopsis lyrata
AL6G42740 5.0kb downstream 5.0kb downstream 8175   true scaffold_6: 19077315-19085489 Arabidopsis lyrata
AL6G42740 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 19080490-19085489 Arabidopsis lyrata
AL6G42740 10.0kb upstream 10.0kb upstream 13175   true scaffold_6: 19067315-19080489 Arabidopsis lyrata
AL6G42740 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 19067315-19077314 Arabidopsis lyrata
AL6G42740 10.0kb downstream 10.0kb downstream 13175   true scaffold_6: 19077315-19090489 Arabidopsis lyrata
AL6G42740 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 19080490-19090489 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373053 5261 Brassicaceae View MSA
123834570 5264 Brassicales-Malvales View MSA
124340427 5266 SBM View MSA
124238636 5268 Malvidae View MSA
124060520 5270 Rosid View MSA
123746002 5271 Pentapetalae View MSA
122791310 5272 Eudicot View MSA
122045188 5273 Angiosperm View MSA
121348359 5274 Embryophyte View MSA
123424549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain