Gene : AL6G42940 A. lyrata v2.1
Defline:  (1 of 5) PTHR16223:SF29 - TRANSCRIPTION FACTOR BHLH117-RELATED Genomic Order:  3052
Name:  ? AL6G42940 Secondary Identifier:  ? PAC:35925734
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G42940 0.5kb upstream 0.5kb upstream 2955   true scaffold_6: 19236521-19239475 Arabidopsis lyrata
AL6G42940 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 19236521-19237020 Arabidopsis lyrata
AL6G42940 0.5kb downstream 0.5kb downstream 2955   true scaffold_6: 19237021-19239975 Arabidopsis lyrata
AL6G42940 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 19239476-19239975 Arabidopsis lyrata
AL6G42940 1.0kb upstream 1.0kb upstream 3455   true scaffold_6: 19236021-19239475 Arabidopsis lyrata
AL6G42940 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 19236021-19237020 Arabidopsis lyrata
AL6G42940 1.0kb downstream 1.0kb downstream 3455   true scaffold_6: 19237021-19240475 Arabidopsis lyrata
AL6G42940 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 19239476-19240475 Arabidopsis lyrata
AL6G42940 2.0kb upstream 2.0kb upstream 4455   true scaffold_6: 19235021-19239475 Arabidopsis lyrata
AL6G42940 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 19235021-19237020 Arabidopsis lyrata
AL6G42940 2.0kb downstream 2.0kb downstream 4455   true scaffold_6: 19237021-19241475 Arabidopsis lyrata
AL6G42940 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 19239476-19241475 Arabidopsis lyrata
AL6G42940 5.0kb upstream 5.0kb upstream 7455   true scaffold_6: 19232021-19239475 Arabidopsis lyrata
AL6G42940 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 19232021-19237020 Arabidopsis lyrata
AL6G42940 5.0kb downstream 5.0kb downstream 7455   true scaffold_6: 19237021-19244475 Arabidopsis lyrata
AL6G42940 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 19239476-19244475 Arabidopsis lyrata
AL6G42940 10.0kb upstream 10.0kb upstream 12455   true scaffold_6: 19227021-19239475 Arabidopsis lyrata
AL6G42940 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 19227021-19237020 Arabidopsis lyrata
AL6G42940 10.0kb downstream 10.0kb downstream 12455   true scaffold_6: 19237021-19249475 Arabidopsis lyrata
AL6G42940 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 19239476-19249475 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377378 5261 Brassicaceae View MSA
123834418 5264 Brassicales-Malvales View MSA
124343262 5266 SBM View MSA
124238615 5268 Malvidae View MSA
124073706 5270 Rosid View MSA
123751595 5271 Pentapetalae View MSA
122793357 5272 Eudicot View MSA
122051356 5273 Angiosperm View MSA
121349754 5274 Embryophyte View MSA
123381429 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain