Gene : AL6G40300 A. lyrata v2.1

Defline:  (1 of 4) 4.4.1.9 - L-3-cyanoalanine synthase / Beta-cyanoalanine synthase Genomic Order:  2843
Name:  ? AL6G40300 Secondary Identifier:  ? PAC:35927424

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ASPSYNII-PWY Arabidopsis lyrata pathologic  
Alyrata CYSTSYN-PWY Arabidopsis lyrata pathologic  
Alyrata P401-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-6936 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G40300 0.5kb upstream 0.5kb upstream 2851   true scaffold_6: 13540755-13543605 Arabidopsis lyrata
AL6G40300 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 13540755-13541254 Arabidopsis lyrata
AL6G40300 0.5kb downstream 0.5kb downstream 2851   true scaffold_6: 13541255-13544105 Arabidopsis lyrata
AL6G40300 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 13543606-13544105 Arabidopsis lyrata
AL6G40300 1.0kb upstream 1.0kb upstream 3351   true scaffold_6: 13540255-13543605 Arabidopsis lyrata
AL6G40300 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 13540255-13541254 Arabidopsis lyrata
AL6G40300 1.0kb downstream 1.0kb downstream 3351   true scaffold_6: 13541255-13544605 Arabidopsis lyrata
AL6G40300 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 13543606-13544605 Arabidopsis lyrata
AL6G40300 2.0kb upstream 2.0kb upstream 4351   true scaffold_6: 13539255-13543605 Arabidopsis lyrata
AL6G40300 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 13539255-13541254 Arabidopsis lyrata
AL6G40300 2.0kb downstream 2.0kb downstream 4351   true scaffold_6: 13541255-13545605 Arabidopsis lyrata
AL6G40300 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 13543606-13545605 Arabidopsis lyrata
AL6G40300 5.0kb upstream 5.0kb upstream 7351   true scaffold_6: 13536255-13543605 Arabidopsis lyrata
AL6G40300 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 13536255-13541254 Arabidopsis lyrata
AL6G40300 5.0kb downstream 5.0kb downstream 7351   true scaffold_6: 13541255-13548605 Arabidopsis lyrata
AL6G40300 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 13543606-13548605 Arabidopsis lyrata
AL6G40300 10.0kb upstream 10.0kb upstream 12351   true scaffold_6: 13531255-13543605 Arabidopsis lyrata
AL6G40300 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 13531255-13541254 Arabidopsis lyrata
AL6G40300 10.0kb downstream 10.0kb downstream 12351   true scaffold_6: 13541255-13553605 Arabidopsis lyrata
AL6G40300 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 13543606-13553605 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363592 5261 Brassicaceae View MSA
123798573 5264 Brassicales-Malvales View MSA
124351332 5266 SBM View MSA
124251516 5268 Malvidae View MSA
124069374 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain