Gene : AL6G38940 A. lyrata v2.1
Defline:  (1 of 1) PF12333 - Rix1 complex component involved in 60S ribosome maturation (Ipi1_N) Genomic Order:  2723
Name:  ? AL6G38940 Secondary Identifier:  ? PAC:35927538
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G38940 0.5kb upstream 0.5kb upstream 5411   true scaffold_6: 12466049-12471459 Arabidopsis lyrata
AL6G38940 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 12470960-12471459 Arabidopsis lyrata
AL6G38940 0.5kb downstream 0.5kb downstream 5411   true scaffold_6: 12465549-12470959 Arabidopsis lyrata
AL6G38940 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 12465549-12466048 Arabidopsis lyrata
AL6G38940 1.0kb upstream 1.0kb upstream 5911   true scaffold_6: 12466049-12471959 Arabidopsis lyrata
AL6G38940 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 12470960-12471959 Arabidopsis lyrata
AL6G38940 1.0kb downstream 1.0kb downstream 5911   true scaffold_6: 12465049-12470959 Arabidopsis lyrata
AL6G38940 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 12465049-12466048 Arabidopsis lyrata
AL6G38940 2.0kb upstream 2.0kb upstream 6911   true scaffold_6: 12466049-12472959 Arabidopsis lyrata
AL6G38940 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 12470960-12472959 Arabidopsis lyrata
AL6G38940 2.0kb downstream 2.0kb downstream 6911   true scaffold_6: 12464049-12470959 Arabidopsis lyrata
AL6G38940 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 12464049-12466048 Arabidopsis lyrata
AL6G38940 5.0kb upstream 5.0kb upstream 9911   true scaffold_6: 12466049-12475959 Arabidopsis lyrata
AL6G38940 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 12470960-12475959 Arabidopsis lyrata
AL6G38940 5.0kb downstream 5.0kb downstream 9911   true scaffold_6: 12461049-12470959 Arabidopsis lyrata
AL6G38940 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 12461049-12466048 Arabidopsis lyrata
AL6G38940 10.0kb upstream 10.0kb upstream 14911   true scaffold_6: 12466049-12480959 Arabidopsis lyrata
AL6G38940 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 12470960-12480959 Arabidopsis lyrata
AL6G38940 10.0kb downstream 10.0kb downstream 14911   true scaffold_6: 12456049-12470959 Arabidopsis lyrata
AL6G38940 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 12456049-12466048 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029601 5273 Angiosperm View MSA
122372867 5261 Brassicaceae View MSA
123830956 5264 Brassicales-Malvales View MSA
124346266 5266 SBM View MSA
124245108 5268 Malvidae View MSA
124068256 5270 Rosid View MSA
123740186 5271 Pentapetalae View MSA
122789427 5272 Eudicot View MSA
121346343 5274 Embryophyte View MSA
123424675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain