Gene : AL6G39560 A. lyrata v2.1

Defline:  (1 of 1) 2.7.1.36 - Mevalonate kinase Genomic Order:  2780
Name:  ? AL6G39560 Secondary Identifier:  ? PAC:35929362

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5910 Arabidopsis lyrata pathologic  
Alyrata PWY-922 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G39560 0.5kb upstream 0.5kb upstream 3185   true scaffold_6: 12825661-12828845 Arabidopsis lyrata
AL6G39560 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 12828346-12828845 Arabidopsis lyrata
AL6G39560 0.5kb downstream 0.5kb downstream 3185   true scaffold_6: 12825161-12828345 Arabidopsis lyrata
AL6G39560 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 12825161-12825660 Arabidopsis lyrata
AL6G39560 1.0kb upstream 1.0kb upstream 3685   true scaffold_6: 12825661-12829345 Arabidopsis lyrata
AL6G39560 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 12828346-12829345 Arabidopsis lyrata
AL6G39560 1.0kb downstream 1.0kb downstream 3685   true scaffold_6: 12824661-12828345 Arabidopsis lyrata
AL6G39560 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 12824661-12825660 Arabidopsis lyrata
AL6G39560 2.0kb upstream 2.0kb upstream 4685   true scaffold_6: 12825661-12830345 Arabidopsis lyrata
AL6G39560 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 12828346-12830345 Arabidopsis lyrata
AL6G39560 2.0kb downstream 2.0kb downstream 4685   true scaffold_6: 12823661-12828345 Arabidopsis lyrata
AL6G39560 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 12823661-12825660 Arabidopsis lyrata
AL6G39560 5.0kb upstream 5.0kb upstream 7685   true scaffold_6: 12825661-12833345 Arabidopsis lyrata
AL6G39560 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 12828346-12833345 Arabidopsis lyrata
AL6G39560 5.0kb downstream 5.0kb downstream 7685   true scaffold_6: 12820661-12828345 Arabidopsis lyrata
AL6G39560 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 12820661-12825660 Arabidopsis lyrata
AL6G39560 10.0kb upstream 10.0kb upstream 12685   true scaffold_6: 12825661-12838345 Arabidopsis lyrata
AL6G39560 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 12828346-12838345 Arabidopsis lyrata
AL6G39560 10.0kb downstream 10.0kb downstream 12685   true scaffold_6: 12815661-12828345 Arabidopsis lyrata
AL6G39560 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 12815661-12825660 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041242 5273 Angiosperm View MSA
122366195 5261 Brassicaceae View MSA
123840116 5264 Brassicales-Malvales View MSA
124346036 5266 SBM View MSA
124238701 5268 Malvidae View MSA
124063522 5270 Rosid View MSA
123737750 5271 Pentapetalae View MSA
122787384 5272 Eudicot View MSA
121345229 5274 Embryophyte View MSA
123380177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain