Gene : AL6G39370 A. lyrata v2.1

Defline:  (1 of 2) K08669 - HtrA serine peptidase 2 (HTRA2, PRSS25) Genomic Order:  2762
Name:  ? AL6G39370 Secondary Identifier:  ? PAC:35929348

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G39370 0.5kb upstream 0.5kb upstream 3608   true scaffold_6: 12739750-12743357 Arabidopsis lyrata
AL6G39370 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 12739750-12740249 Arabidopsis lyrata
AL6G39370 0.5kb downstream 0.5kb downstream 3608   true scaffold_6: 12740250-12743857 Arabidopsis lyrata
AL6G39370 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 12743358-12743857 Arabidopsis lyrata
AL6G39370 1.0kb upstream 1.0kb upstream 4108   true scaffold_6: 12739250-12743357 Arabidopsis lyrata
AL6G39370 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 12739250-12740249 Arabidopsis lyrata
AL6G39370 1.0kb downstream 1.0kb downstream 4108   true scaffold_6: 12740250-12744357 Arabidopsis lyrata
AL6G39370 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 12743358-12744357 Arabidopsis lyrata
AL6G39370 2.0kb upstream 2.0kb upstream 5108   true scaffold_6: 12738250-12743357 Arabidopsis lyrata
AL6G39370 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 12738250-12740249 Arabidopsis lyrata
AL6G39370 2.0kb downstream 2.0kb downstream 5108   true scaffold_6: 12740250-12745357 Arabidopsis lyrata
AL6G39370 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 12743358-12745357 Arabidopsis lyrata
AL6G39370 5.0kb upstream 5.0kb upstream 8108   true scaffold_6: 12735250-12743357 Arabidopsis lyrata
AL6G39370 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 12735250-12740249 Arabidopsis lyrata
AL6G39370 5.0kb downstream 5.0kb downstream 8108   true scaffold_6: 12740250-12748357 Arabidopsis lyrata
AL6G39370 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 12743358-12748357 Arabidopsis lyrata
AL6G39370 10.0kb upstream 10.0kb upstream 13108   true scaffold_6: 12730250-12743357 Arabidopsis lyrata
AL6G39370 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 12730250-12740249 Arabidopsis lyrata
AL6G39370 10.0kb downstream 10.0kb downstream 13108   true scaffold_6: 12740250-12753357 Arabidopsis lyrata
AL6G39370 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 12743358-12753357 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362740 5261 Brassicaceae View MSA
123834864 5264 Brassicales-Malvales View MSA
124336967 5266 SBM View MSA
124239916 5268 Malvidae View MSA
124065784 5270 Rosid View MSA
123744381 5271 Pentapetalae View MSA
122797059 5272 Eudicot View MSA
122045030 5273 Angiosperm View MSA
121344976 5274 Embryophyte View MSA
123424771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain