Gene : AL6G37280 A. lyrata v2.1

Defline:  (1 of 1) 2.1.1.204 - tRNA (cytosine(38)-C(5))-methyltransferase Genomic Order:  2583
Name:  ? AL6G37280 Secondary Identifier:  ? PAC:35925885

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G37280 0.5kb upstream 0.5kb upstream 3359   true scaffold_6: 11434926-11438284 Arabidopsis lyrata
AL6G37280 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 11437785-11438284 Arabidopsis lyrata
AL6G37280 0.5kb downstream 0.5kb downstream 3359   true scaffold_6: 11434426-11437784 Arabidopsis lyrata
AL6G37280 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 11434426-11434925 Arabidopsis lyrata
AL6G37280 1.0kb upstream 1.0kb upstream 3859   true scaffold_6: 11434926-11438784 Arabidopsis lyrata
AL6G37280 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 11437785-11438784 Arabidopsis lyrata
AL6G37280 1.0kb downstream 1.0kb downstream 3859   true scaffold_6: 11433926-11437784 Arabidopsis lyrata
AL6G37280 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 11433926-11434925 Arabidopsis lyrata
AL6G37280 2.0kb upstream 2.0kb upstream 4859   true scaffold_6: 11434926-11439784 Arabidopsis lyrata
AL6G37280 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 11437785-11439784 Arabidopsis lyrata
AL6G37280 2.0kb downstream 2.0kb downstream 4859   true scaffold_6: 11432926-11437784 Arabidopsis lyrata
AL6G37280 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 11432926-11434925 Arabidopsis lyrata
AL6G37280 5.0kb upstream 5.0kb upstream 7859   true scaffold_6: 11434926-11442784 Arabidopsis lyrata
AL6G37280 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 11437785-11442784 Arabidopsis lyrata
AL6G37280 5.0kb downstream 5.0kb downstream 7859   true scaffold_6: 11429926-11437784 Arabidopsis lyrata
AL6G37280 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 11429926-11434925 Arabidopsis lyrata
AL6G37280 10.0kb upstream 10.0kb upstream 12859   true scaffold_6: 11434926-11447784 Arabidopsis lyrata
AL6G37280 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 11437785-11447784 Arabidopsis lyrata
AL6G37280 10.0kb downstream 10.0kb downstream 12859   true scaffold_6: 11424926-11437784 Arabidopsis lyrata
AL6G37280 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 11424926-11434925 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373730 5261 Brassicaceae View MSA
123836316 5264 Brassicales-Malvales View MSA
124343310 5266 SBM View MSA
124237015 5268 Malvidae View MSA
124060952 5270 Rosid View MSA
123740038 5271 Pentapetalae View MSA
122790174 5272 Eudicot View MSA
122042989 5273 Angiosperm View MSA
121345070 5274 Embryophyte View MSA
123423972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain