Gene : AL6G34740 A. lyrata v2.1

Defline:  (1 of 2) 2.7.1.138 - Ceramide kinase / Acylsphingosine kinase Genomic Order:  2347
Name:  ? AL6G34740 Secondary Identifier:  ? PAC:35926188

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5129 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G34740 0.5kb upstream 0.5kb upstream 5380   true scaffold_6: 10046890-10052269 Arabidopsis lyrata
AL6G34740 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 10051770-10052269 Arabidopsis lyrata
AL6G34740 0.5kb downstream 0.5kb downstream 5380   true scaffold_6: 10046390-10051769 Arabidopsis lyrata
AL6G34740 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 10046390-10046889 Arabidopsis lyrata
AL6G34740 1.0kb upstream 1.0kb upstream 5880   true scaffold_6: 10046890-10052769 Arabidopsis lyrata
AL6G34740 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 10051770-10052769 Arabidopsis lyrata
AL6G34740 1.0kb downstream 1.0kb downstream 5880   true scaffold_6: 10045890-10051769 Arabidopsis lyrata
AL6G34740 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 10045890-10046889 Arabidopsis lyrata
AL6G34740 2.0kb upstream 2.0kb upstream 6880   true scaffold_6: 10046890-10053769 Arabidopsis lyrata
AL6G34740 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 10051770-10053769 Arabidopsis lyrata
AL6G34740 2.0kb downstream 2.0kb downstream 6880   true scaffold_6: 10044890-10051769 Arabidopsis lyrata
AL6G34740 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 10044890-10046889 Arabidopsis lyrata
AL6G34740 5.0kb upstream 5.0kb upstream 9880   true scaffold_6: 10046890-10056769 Arabidopsis lyrata
AL6G34740 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 10051770-10056769 Arabidopsis lyrata
AL6G34740 5.0kb downstream 5.0kb downstream 9880   true scaffold_6: 10041890-10051769 Arabidopsis lyrata
AL6G34740 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 10041890-10046889 Arabidopsis lyrata
AL6G34740 10.0kb upstream 10.0kb upstream 14880   true scaffold_6: 10046890-10061769 Arabidopsis lyrata
AL6G34740 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 10051770-10061769 Arabidopsis lyrata
AL6G34740 10.0kb downstream 10.0kb downstream 14880   true scaffold_6: 10036890-10051769 Arabidopsis lyrata
AL6G34740 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 10036890-10046889 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363319 5261 Brassicaceae View MSA
123836450 5264 Brassicales-Malvales View MSA
124345813 5266 SBM View MSA
124254227 5268 Malvidae View MSA
124074924 5270 Rosid View MSA
123752126 5271 Pentapetalae View MSA
122793643 5272 Eudicot View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain