Gene : AL6G34270 A. lyrata v2.1

Defline:  (1 of 1) K13123 - G patch domain-containing protein 1 (GPATCH1) Genomic Order:  2301
Name:  ? AL6G34270 Secondary Identifier:  ? PAC:35928817

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G34270 0.5kb upstream 0.5kb upstream 6658   true scaffold_6: 9811549-9818206 Arabidopsis lyrata
AL6G34270 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 9817707-9818206 Arabidopsis lyrata
AL6G34270 0.5kb downstream 0.5kb downstream 6658   true scaffold_6: 9811049-9817706 Arabidopsis lyrata
AL6G34270 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 9811049-9811548 Arabidopsis lyrata
AL6G34270 1.0kb upstream 1.0kb upstream 7158   true scaffold_6: 9811549-9818706 Arabidopsis lyrata
AL6G34270 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 9817707-9818706 Arabidopsis lyrata
AL6G34270 1.0kb downstream 1.0kb downstream 7158   true scaffold_6: 9810549-9817706 Arabidopsis lyrata
AL6G34270 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 9810549-9811548 Arabidopsis lyrata
AL6G34270 2.0kb upstream 2.0kb upstream 8158   true scaffold_6: 9811549-9819706 Arabidopsis lyrata
AL6G34270 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 9817707-9819706 Arabidopsis lyrata
AL6G34270 2.0kb downstream 2.0kb downstream 8158   true scaffold_6: 9809549-9817706 Arabidopsis lyrata
AL6G34270 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 9809549-9811548 Arabidopsis lyrata
AL6G34270 5.0kb upstream 5.0kb upstream 11158   true scaffold_6: 9811549-9822706 Arabidopsis lyrata
AL6G34270 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 9817707-9822706 Arabidopsis lyrata
AL6G34270 5.0kb downstream 5.0kb downstream 11158   true scaffold_6: 9806549-9817706 Arabidopsis lyrata
AL6G34270 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 9806549-9811548 Arabidopsis lyrata
AL6G34270 10.0kb upstream 10.0kb upstream 16158   true scaffold_6: 9811549-9827706 Arabidopsis lyrata
AL6G34270 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 9817707-9827706 Arabidopsis lyrata
AL6G34270 10.0kb downstream 10.0kb downstream 16158   true scaffold_6: 9801549-9817706 Arabidopsis lyrata
AL6G34270 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 9801549-9811548 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377009 5261 Brassicaceae View MSA
123833687 5264 Brassicales-Malvales View MSA
124340277 5266 SBM View MSA
124238675 5268 Malvidae View MSA
124067571 5270 Rosid View MSA
123746578 5271 Pentapetalae View MSA
122793732 5272 Eudicot View MSA
122044115 5273 Angiosperm View MSA
121345398 5274 Embryophyte View MSA
123424133 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain