Gene : AL6G35300 A. lyrata v2.1

Defline:  (1 of 2) PTHR11972:SF62 - FERRIC REDUCTION OXIDASE 4-RELATED Genomic Order:  2399
Name:  ? AL6G35300 Secondary Identifier:  ? PAC:35927226

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5934 Arabidopsis lyrata pathologic  
Alyrata PWY-6854 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G35300 0.5kb upstream 0.5kb upstream 3986   true scaffold_6: 10289326-10293311 Arabidopsis lyrata
AL6G35300 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 10292812-10293311 Arabidopsis lyrata
AL6G35300 0.5kb downstream 0.5kb downstream 3986   true scaffold_6: 10288826-10292811 Arabidopsis lyrata
AL6G35300 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 10288826-10289325 Arabidopsis lyrata
AL6G35300 1.0kb upstream 1.0kb upstream 4486   true scaffold_6: 10289326-10293811 Arabidopsis lyrata
AL6G35300 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 10292812-10293811 Arabidopsis lyrata
AL6G35300 1.0kb downstream 1.0kb downstream 4486   true scaffold_6: 10288326-10292811 Arabidopsis lyrata
AL6G35300 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 10288326-10289325 Arabidopsis lyrata
AL6G35300 2.0kb upstream 2.0kb upstream 5486   true scaffold_6: 10289326-10294811 Arabidopsis lyrata
AL6G35300 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 10292812-10294811 Arabidopsis lyrata
AL6G35300 2.0kb downstream 2.0kb downstream 5486   true scaffold_6: 10287326-10292811 Arabidopsis lyrata
AL6G35300 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 10287326-10289325 Arabidopsis lyrata
AL6G35300 5.0kb upstream 5.0kb upstream 8486   true scaffold_6: 10289326-10297811 Arabidopsis lyrata
AL6G35300 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 10292812-10297811 Arabidopsis lyrata
AL6G35300 5.0kb downstream 5.0kb downstream 8486   true scaffold_6: 10284326-10292811 Arabidopsis lyrata
AL6G35300 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 10284326-10289325 Arabidopsis lyrata
AL6G35300 10.0kb upstream 10.0kb upstream 13486   true scaffold_6: 10289326-10302811 Arabidopsis lyrata
AL6G35300 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 10292812-10302811 Arabidopsis lyrata
AL6G35300 10.0kb downstream 10.0kb downstream 13486   true scaffold_6: 10279326-10292811 Arabidopsis lyrata
AL6G35300 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 10279326-10289325 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362985 5261 Brassicaceae View MSA
123827837 5264 Brassicales-Malvales View MSA
124321489 5266 SBM View MSA
124252171 5268 Malvidae View MSA
124071281 5270 Rosid View MSA
123746738 5271 Pentapetalae View MSA
122787767 5272 Eudicot View MSA
122051677 5273 Angiosperm View MSA
121345980 5274 Embryophyte View MSA
123428579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain