Gene : AL6G35310 A. lyrata v2.1

Defline:  (1 of 2) PTHR11972:SF62 - FERRIC REDUCTION OXIDASE 4-RELATED Genomic Order:  2400
Name:  ? AL6G35310 Secondary Identifier:  ? PAC:35930029

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5934 Arabidopsis lyrata pathologic  
Alyrata PWY-6854 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G35310 0.5kb upstream 0.5kb upstream 3777   true scaffold_6: 10296305-10300081 Arabidopsis lyrata
AL6G35310 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 10299582-10300081 Arabidopsis lyrata
AL6G35310 0.5kb downstream 0.5kb downstream 3777   true scaffold_6: 10295805-10299581 Arabidopsis lyrata
AL6G35310 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 10295805-10296304 Arabidopsis lyrata
AL6G35310 1.0kb upstream 1.0kb upstream 4277   true scaffold_6: 10296305-10300581 Arabidopsis lyrata
AL6G35310 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 10299582-10300581 Arabidopsis lyrata
AL6G35310 1.0kb downstream 1.0kb downstream 4277   true scaffold_6: 10295305-10299581 Arabidopsis lyrata
AL6G35310 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 10295305-10296304 Arabidopsis lyrata
AL6G35310 2.0kb upstream 2.0kb upstream 5277   true scaffold_6: 10296305-10301581 Arabidopsis lyrata
AL6G35310 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 10299582-10301581 Arabidopsis lyrata
AL6G35310 2.0kb downstream 2.0kb downstream 5277   true scaffold_6: 10294305-10299581 Arabidopsis lyrata
AL6G35310 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 10294305-10296304 Arabidopsis lyrata
AL6G35310 5.0kb upstream 5.0kb upstream 8277   true scaffold_6: 10296305-10304581 Arabidopsis lyrata
AL6G35310 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 10299582-10304581 Arabidopsis lyrata
AL6G35310 5.0kb downstream 5.0kb downstream 8277   true scaffold_6: 10291305-10299581 Arabidopsis lyrata
AL6G35310 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 10291305-10296304 Arabidopsis lyrata
AL6G35310 10.0kb upstream 10.0kb upstream 13277   true scaffold_6: 10296305-10309581 Arabidopsis lyrata
AL6G35310 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 10299582-10309581 Arabidopsis lyrata
AL6G35310 10.0kb downstream 10.0kb downstream 13277   true scaffold_6: 10286305-10299581 Arabidopsis lyrata
AL6G35310 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 10286305-10296304 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362985 5261 Brassicaceae View MSA
123827837 5264 Brassicales-Malvales View MSA
124321489 5266 SBM View MSA
124252171 5268 Malvidae View MSA
124071281 5270 Rosid View MSA
123746738 5271 Pentapetalae View MSA
122787767 5272 Eudicot View MSA
122051677 5273 Angiosperm View MSA
121345980 5274 Embryophyte View MSA
123428579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain