Gene : AL6G35480 A. lyrata v2.1
Defline:  (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  2416
Name:  ? AL6G35480 Secondary Identifier:  ? PAC:35927882
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G35480 0.5kb upstream 0.5kb upstream 4987   true scaffold_6: 10385985-10390971 Arabidopsis lyrata
AL6G35480 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 10390472-10390971 Arabidopsis lyrata
AL6G35480 0.5kb downstream 0.5kb downstream 4987   true scaffold_6: 10385485-10390471 Arabidopsis lyrata
AL6G35480 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 10385485-10385984 Arabidopsis lyrata
AL6G35480 1.0kb upstream 1.0kb upstream 5487   true scaffold_6: 10385985-10391471 Arabidopsis lyrata
AL6G35480 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 10390472-10391471 Arabidopsis lyrata
AL6G35480 1.0kb downstream 1.0kb downstream 5487   true scaffold_6: 10384985-10390471 Arabidopsis lyrata
AL6G35480 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 10384985-10385984 Arabidopsis lyrata
AL6G35480 2.0kb upstream 2.0kb upstream 6487   true scaffold_6: 10385985-10392471 Arabidopsis lyrata
AL6G35480 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 10390472-10392471 Arabidopsis lyrata
AL6G35480 2.0kb downstream 2.0kb downstream 6487   true scaffold_6: 10383985-10390471 Arabidopsis lyrata
AL6G35480 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 10383985-10385984 Arabidopsis lyrata
AL6G35480 5.0kb upstream 5.0kb upstream 9487   true scaffold_6: 10385985-10395471 Arabidopsis lyrata
AL6G35480 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 10390472-10395471 Arabidopsis lyrata
AL6G35480 5.0kb downstream 5.0kb downstream 9487   true scaffold_6: 10380985-10390471 Arabidopsis lyrata
AL6G35480 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 10380985-10385984 Arabidopsis lyrata
AL6G35480 10.0kb upstream 10.0kb upstream 14487   true scaffold_6: 10385985-10400471 Arabidopsis lyrata
AL6G35480 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 10390472-10400471 Arabidopsis lyrata
AL6G35480 10.0kb downstream 10.0kb downstream 14487   true scaffold_6: 10375985-10390471 Arabidopsis lyrata
AL6G35480 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 10375985-10385984 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026363 5273 Angiosperm View MSA
122375880 5261 Brassicaceae View MSA
123828042 5264 Brassicales-Malvales View MSA
124344212 5266 SBM View MSA
124246245 5268 Malvidae View MSA
124065012 5270 Rosid View MSA
123740689 5271 Pentapetalae View MSA
122788659 5272 Eudicot View MSA
121349199 5274 Embryophyte View MSA
123381214 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain