Gene : AL6G34980 A. lyrata v2.1

Defline:  (1 of 1) K03025 - DNA-directed RNA polymerase III subunit RPC6 (RPC6, POLR3F) Genomic Order:  2369
Name:  ? AL6G34980 Secondary Identifier:  ? PAC:35927347

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G34980 0.5kb upstream 0.5kb upstream 1535   true scaffold_6: 10163182-10164716 Arabidopsis lyrata
AL6G34980 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 10164217-10164716 Arabidopsis lyrata
AL6G34980 0.5kb downstream 0.5kb downstream 1535   true scaffold_6: 10162682-10164216 Arabidopsis lyrata
AL6G34980 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 10162682-10163181 Arabidopsis lyrata
AL6G34980 1.0kb upstream 1.0kb upstream 2035   true scaffold_6: 10163182-10165216 Arabidopsis lyrata
AL6G34980 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 10164217-10165216 Arabidopsis lyrata
AL6G34980 1.0kb downstream 1.0kb downstream 2035   true scaffold_6: 10162182-10164216 Arabidopsis lyrata
AL6G34980 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 10162182-10163181 Arabidopsis lyrata
AL6G34980 2.0kb upstream 2.0kb upstream 3035   true scaffold_6: 10163182-10166216 Arabidopsis lyrata
AL6G34980 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 10164217-10166216 Arabidopsis lyrata
AL6G34980 2.0kb downstream 2.0kb downstream 3035   true scaffold_6: 10161182-10164216 Arabidopsis lyrata
AL6G34980 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 10161182-10163181 Arabidopsis lyrata
AL6G34980 5.0kb upstream 5.0kb upstream 6035   true scaffold_6: 10163182-10169216 Arabidopsis lyrata
AL6G34980 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 10164217-10169216 Arabidopsis lyrata
AL6G34980 5.0kb downstream 5.0kb downstream 6035   true scaffold_6: 10158182-10164216 Arabidopsis lyrata
AL6G34980 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 10158182-10163181 Arabidopsis lyrata
AL6G34980 10.0kb upstream 10.0kb upstream 11035   true scaffold_6: 10163182-10174216 Arabidopsis lyrata
AL6G34980 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 10164217-10174216 Arabidopsis lyrata
AL6G34980 10.0kb downstream 10.0kb downstream 11035   true scaffold_6: 10153182-10164216 Arabidopsis lyrata
AL6G34980 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 10153182-10163181 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363016 5261 Brassicaceae View MSA
123833239 5264 Brassicales-Malvales View MSA
124340164 5266 SBM View MSA
124245053 5268 Malvidae View MSA
124066352 5270 Rosid View MSA
123744384 5271 Pentapetalae View MSA
122788690 5272 Eudicot View MSA
122046766 5273 Angiosperm View MSA
121344415 5274 Embryophyte View MSA
123425900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain