Gene : AL6G35010 A. lyrata v2.1

Defline:  (1 of 3) K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) Genomic Order:  2372
Name:  ? AL6G35010 Secondary Identifier:  ? PAC:35929584

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G35010 0.5kb upstream 0.5kb upstream 2128   true scaffold_6: 10174611-10176738 Arabidopsis lyrata
AL6G35010 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 10174611-10175110 Arabidopsis lyrata
AL6G35010 0.5kb downstream 0.5kb downstream 2128   true scaffold_6: 10175111-10177238 Arabidopsis lyrata
AL6G35010 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 10176739-10177238 Arabidopsis lyrata
AL6G35010 1.0kb upstream 1.0kb upstream 2628   true scaffold_6: 10174111-10176738 Arabidopsis lyrata
AL6G35010 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 10174111-10175110 Arabidopsis lyrata
AL6G35010 1.0kb downstream 1.0kb downstream 2628   true scaffold_6: 10175111-10177738 Arabidopsis lyrata
AL6G35010 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 10176739-10177738 Arabidopsis lyrata
AL6G35010 2.0kb upstream 2.0kb upstream 3628   true scaffold_6: 10173111-10176738 Arabidopsis lyrata
AL6G35010 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 10173111-10175110 Arabidopsis lyrata
AL6G35010 2.0kb downstream 2.0kb downstream 3628   true scaffold_6: 10175111-10178738 Arabidopsis lyrata
AL6G35010 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 10176739-10178738 Arabidopsis lyrata
AL6G35010 5.0kb upstream 5.0kb upstream 6628   true scaffold_6: 10170111-10176738 Arabidopsis lyrata
AL6G35010 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 10170111-10175110 Arabidopsis lyrata
AL6G35010 5.0kb downstream 5.0kb downstream 6628   true scaffold_6: 10175111-10181738 Arabidopsis lyrata
AL6G35010 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 10176739-10181738 Arabidopsis lyrata
AL6G35010 10.0kb upstream 10.0kb upstream 11628   true scaffold_6: 10165111-10176738 Arabidopsis lyrata
AL6G35010 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 10165111-10175110 Arabidopsis lyrata
AL6G35010 10.0kb downstream 10.0kb downstream 11628   true scaffold_6: 10175111-10186738 Arabidopsis lyrata
AL6G35010 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 10176739-10186738 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377292 5261 Brassicaceae View MSA
123837703 5264 Brassicales-Malvales View MSA
124342825 5266 SBM View MSA
124249786 5268 Malvidae View MSA
124051447 5270 Rosid View MSA
123749693 5271 Pentapetalae View MSA
122793878 5272 Eudicot View MSA
122043681 5273 Angiosperm View MSA
121350599 5274 Embryophyte View MSA
123427986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain