Gene : AL6G33450 A. lyrata v2.1

Defline:  (1 of 2) PTHR33083:SF5 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  2224
Name:  ? AL6G33450 Secondary Identifier:  ? PAC:35928573

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G33450 0.5kb upstream 0.5kb upstream 1474   true scaffold_6: 9371142-9372615 Arabidopsis lyrata
AL6G33450 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 9371142-9371641 Arabidopsis lyrata
AL6G33450 0.5kb downstream 0.5kb downstream 1474   true scaffold_6: 9371642-9373115 Arabidopsis lyrata
AL6G33450 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 9372616-9373115 Arabidopsis lyrata
AL6G33450 1.0kb upstream 1.0kb upstream 1974   true scaffold_6: 9370642-9372615 Arabidopsis lyrata
AL6G33450 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 9370642-9371641 Arabidopsis lyrata
AL6G33450 1.0kb downstream 1.0kb downstream 1974   true scaffold_6: 9371642-9373615 Arabidopsis lyrata
AL6G33450 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 9372616-9373615 Arabidopsis lyrata
AL6G33450 2.0kb upstream 2.0kb upstream 2974   true scaffold_6: 9369642-9372615 Arabidopsis lyrata
AL6G33450 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 9369642-9371641 Arabidopsis lyrata
AL6G33450 2.0kb downstream 2.0kb downstream 2974   true scaffold_6: 9371642-9374615 Arabidopsis lyrata
AL6G33450 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 9372616-9374615 Arabidopsis lyrata
AL6G33450 5.0kb upstream 5.0kb upstream 5974   true scaffold_6: 9366642-9372615 Arabidopsis lyrata
AL6G33450 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 9366642-9371641 Arabidopsis lyrata
AL6G33450 5.0kb downstream 5.0kb downstream 5974   true scaffold_6: 9371642-9377615 Arabidopsis lyrata
AL6G33450 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 9372616-9377615 Arabidopsis lyrata
AL6G33450 10.0kb upstream 10.0kb upstream 10974   true scaffold_6: 9361642-9372615 Arabidopsis lyrata
AL6G33450 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 9361642-9371641 Arabidopsis lyrata
AL6G33450 10.0kb downstream 10.0kb downstream 10974   true scaffold_6: 9371642-9382615 Arabidopsis lyrata
AL6G33450 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 9372616-9382615 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369495 5261 Brassicaceae View MSA
123836097 5264 Brassicales-Malvales View MSA
124346132 5266 SBM View MSA
124241466 5268 Malvidae View MSA
124060830 5270 Rosid View MSA
123740315 5271 Pentapetalae View MSA
122789916 5272 Eudicot View MSA
122047516 5273 Angiosperm View MSA
121310750 5274 Embryophyte View MSA
123348161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain