Gene : AL6G31810 A. lyrata v2.1

Defline:  (1 of 1) PTHR11062//PTHR11062:SF113 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  2067
Name:  ? AL6G31810 Secondary Identifier:  ? PAC:35926993

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5980 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G31810 0.5kb upstream 0.5kb upstream 3453   true scaffold_6: 8571362-8574814 Arabidopsis lyrata
AL6G31810 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 8574315-8574814 Arabidopsis lyrata
AL6G31810 0.5kb downstream 0.5kb downstream 3453   true scaffold_6: 8570862-8574314 Arabidopsis lyrata
AL6G31810 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 8570862-8571361 Arabidopsis lyrata
AL6G31810 1.0kb upstream 1.0kb upstream 3953   true scaffold_6: 8571362-8575314 Arabidopsis lyrata
AL6G31810 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 8574315-8575314 Arabidopsis lyrata
AL6G31810 1.0kb downstream 1.0kb downstream 3953   true scaffold_6: 8570362-8574314 Arabidopsis lyrata
AL6G31810 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 8570362-8571361 Arabidopsis lyrata
AL6G31810 2.0kb upstream 2.0kb upstream 4953   true scaffold_6: 8571362-8576314 Arabidopsis lyrata
AL6G31810 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 8574315-8576314 Arabidopsis lyrata
AL6G31810 2.0kb downstream 2.0kb downstream 4953   true scaffold_6: 8569362-8574314 Arabidopsis lyrata
AL6G31810 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 8569362-8571361 Arabidopsis lyrata
AL6G31810 5.0kb upstream 5.0kb upstream 7953   true scaffold_6: 8571362-8579314 Arabidopsis lyrata
AL6G31810 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 8574315-8579314 Arabidopsis lyrata
AL6G31810 5.0kb downstream 5.0kb downstream 7953   true scaffold_6: 8566362-8574314 Arabidopsis lyrata
AL6G31810 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 8566362-8571361 Arabidopsis lyrata
AL6G31810 10.0kb upstream 10.0kb upstream 12953   true scaffold_6: 8571362-8584314 Arabidopsis lyrata
AL6G31810 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 8574315-8584314 Arabidopsis lyrata
AL6G31810 10.0kb downstream 10.0kb downstream 12953   true scaffold_6: 8561362-8574314 Arabidopsis lyrata
AL6G31810 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 8561362-8571361 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367864 5261 Brassicaceae View MSA
123832735 5264 Brassicales-Malvales View MSA
124351163 5266 SBM View MSA
124252793 5268 Malvidae View MSA
124072198 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain