Gene : AL6G32470 A. lyrata v2.1

Defline:  (1 of 1) K16274 - E3 ubiquitin-protein ligase AIP2 [EC:6.3.2.19] (AIP2) Genomic Order:  2131
Name:  ? AL6G32470 Secondary Identifier:  ? PAC:35926696

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G32470 0.5kb upstream 0.5kb upstream 2395   true scaffold_6: 8868449-8870843 Arabidopsis lyrata
AL6G32470 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 8870344-8870843 Arabidopsis lyrata
AL6G32470 0.5kb downstream 0.5kb downstream 2395   true scaffold_6: 8867949-8870343 Arabidopsis lyrata
AL6G32470 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 8867949-8868448 Arabidopsis lyrata
AL6G32470 1.0kb upstream 1.0kb upstream 2895   true scaffold_6: 8868449-8871343 Arabidopsis lyrata
AL6G32470 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 8870344-8871343 Arabidopsis lyrata
AL6G32470 1.0kb downstream 1.0kb downstream 2895   true scaffold_6: 8867449-8870343 Arabidopsis lyrata
AL6G32470 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 8867449-8868448 Arabidopsis lyrata
AL6G32470 2.0kb upstream 2.0kb upstream 3895   true scaffold_6: 8868449-8872343 Arabidopsis lyrata
AL6G32470 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 8870344-8872343 Arabidopsis lyrata
AL6G32470 2.0kb downstream 2.0kb downstream 3895   true scaffold_6: 8866449-8870343 Arabidopsis lyrata
AL6G32470 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 8866449-8868448 Arabidopsis lyrata
AL6G32470 5.0kb upstream 5.0kb upstream 6895   true scaffold_6: 8868449-8875343 Arabidopsis lyrata
AL6G32470 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 8870344-8875343 Arabidopsis lyrata
AL6G32470 5.0kb downstream 5.0kb downstream 6895   true scaffold_6: 8863449-8870343 Arabidopsis lyrata
AL6G32470 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 8863449-8868448 Arabidopsis lyrata
AL6G32470 10.0kb upstream 10.0kb upstream 11895   true scaffold_6: 8868449-8880343 Arabidopsis lyrata
AL6G32470 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 8870344-8880343 Arabidopsis lyrata
AL6G32470 10.0kb downstream 10.0kb downstream 11895   true scaffold_6: 8858449-8870343 Arabidopsis lyrata
AL6G32470 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 8858449-8868448 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
122369760 5261 Brassicaceae View MSA
123834702 5264 Brassicales-Malvales View MSA
124342804 5266 SBM View MSA
124243056 5268 Malvidae View MSA
124060743 5270 Rosid View MSA
123738156 5271 Pentapetalae View MSA
122787757 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain