Gene : AL6G52190 A. lyrata v2.1

Defline:  (1 of 2) KOG0229 - Phosphatidylinositol-4-phosphate 5-kinase Genomic Order:  3899
Name:  ? AL6G52190 Secondary Identifier:  ? PAC:35929971

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6351 Arabidopsis lyrata pathologic  
Alyrata PWY-6352 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G52190 0.5kb upstream 0.5kb upstream 2439   true scaffold_6: 24462684-24465122 Arabidopsis lyrata
AL6G52190 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 24462684-24463183 Arabidopsis lyrata
AL6G52190 0.5kb downstream 0.5kb downstream 2439   true scaffold_6: 24463184-24465622 Arabidopsis lyrata
AL6G52190 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 24465123-24465622 Arabidopsis lyrata
AL6G52190 1.0kb upstream 1.0kb upstream 2939   true scaffold_6: 24462184-24465122 Arabidopsis lyrata
AL6G52190 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 24462184-24463183 Arabidopsis lyrata
AL6G52190 1.0kb downstream 1.0kb downstream 2939   true scaffold_6: 24463184-24466122 Arabidopsis lyrata
AL6G52190 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 24465123-24466122 Arabidopsis lyrata
AL6G52190 2.0kb upstream 2.0kb upstream 3939   true scaffold_6: 24461184-24465122 Arabidopsis lyrata
AL6G52190 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 24461184-24463183 Arabidopsis lyrata
AL6G52190 2.0kb downstream 2.0kb downstream 3939   true scaffold_6: 24463184-24467122 Arabidopsis lyrata
AL6G52190 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 24465123-24467122 Arabidopsis lyrata
AL6G52190 5.0kb upstream 5.0kb upstream 6939   true scaffold_6: 24458184-24465122 Arabidopsis lyrata
AL6G52190 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 24458184-24463183 Arabidopsis lyrata
AL6G52190 5.0kb downstream 5.0kb downstream 6939   true scaffold_6: 24463184-24470122 Arabidopsis lyrata
AL6G52190 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 24465123-24470122 Arabidopsis lyrata
AL6G52190 10.0kb upstream 10.0kb upstream 11939   true scaffold_6: 24453184-24465122 Arabidopsis lyrata
AL6G52190 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 24453184-24463183 Arabidopsis lyrata
AL6G52190 10.0kb downstream 10.0kb downstream 11939   true scaffold_6: 24463184-24475122 Arabidopsis lyrata
AL6G52190 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 24465123-24475122 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027967 5273 Angiosperm View MSA
122371912 5261 Brassicaceae View MSA
123800257 5264 Brassicales-Malvales View MSA
124297693 5266 SBM View MSA
124250315 5268 Malvidae View MSA
124037204 5270 Rosid View MSA
123741083 5271 Pentapetalae View MSA
122791627 5272 Eudicot View MSA
121349579 5274 Embryophyte View MSA
123428114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain