Gene : AL6G52060 A. lyrata v2.1
Defline:  (1 of 2) PTHR31576:SF2 - TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B Genomic Order:  3886
Name:  ? AL6G52060 Secondary Identifier:  ? PAC:35927154
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0 Pathways

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G52060 0.5kb upstream 0.5kb upstream 2708   true scaffold_6: 24395490-24398197 Arabidopsis lyrata
AL6G52060 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 24397698-24398197 Arabidopsis lyrata
AL6G52060 0.5kb downstream 0.5kb downstream 2708   true scaffold_6: 24394990-24397697 Arabidopsis lyrata
AL6G52060 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 24394990-24395489 Arabidopsis lyrata
AL6G52060 1.0kb upstream 1.0kb upstream 3208   true scaffold_6: 24395490-24398697 Arabidopsis lyrata
AL6G52060 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 24397698-24398697 Arabidopsis lyrata
AL6G52060 1.0kb downstream 1.0kb downstream 3208   true scaffold_6: 24394490-24397697 Arabidopsis lyrata
AL6G52060 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 24394490-24395489 Arabidopsis lyrata
AL6G52060 2.0kb upstream 2.0kb upstream 4208   true scaffold_6: 24395490-24399697 Arabidopsis lyrata
AL6G52060 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 24397698-24399697 Arabidopsis lyrata
AL6G52060 2.0kb downstream 2.0kb downstream 4208   true scaffold_6: 24393490-24397697 Arabidopsis lyrata
AL6G52060 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 24393490-24395489 Arabidopsis lyrata
AL6G52060 5.0kb upstream 5.0kb upstream 7208   true scaffold_6: 24395490-24402697 Arabidopsis lyrata
AL6G52060 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 24397698-24402697 Arabidopsis lyrata
AL6G52060 5.0kb downstream 5.0kb downstream 7208   true scaffold_6: 24390490-24397697 Arabidopsis lyrata
AL6G52060 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 24390490-24395489 Arabidopsis lyrata
AL6G52060 10.0kb upstream 10.0kb upstream 12208   true scaffold_6: 24395490-24407697 Arabidopsis lyrata
AL6G52060 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 24397698-24407697 Arabidopsis lyrata
AL6G52060 10.0kb downstream 10.0kb downstream 12208   true scaffold_6: 24385490-24397697 Arabidopsis lyrata
AL6G52060 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 24385490-24395489 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122327524 5261 Brassicaceae View MSA
123768947 5264 Brassicales-Malvales View MSA
124267524 5266 SBM View MSA
124244133 5268 Malvidae View MSA
124065937 5270 Rosid View MSA
123742102 5271 Pentapetalae View MSA
122796533 5272 Eudicot View MSA
122050673 5273 Angiosperm View MSA
121345414 5274 Embryophyte View MSA
123427215 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain