Gene : AL6G52490 A. lyrata v2.1
Defline:  (1 of 4) PTHR24093:SF289 - CALCIUM-TRANSPORTING ATPASE 1, ENDOPLASMIC RETICULUM-TYPE-RELATED Genomic Order:  3926
Name:  ? AL6G52490 Secondary Identifier:  ? PAC:35927828
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G52490 0.5kb upstream 0.5kb upstream 4723   true scaffold_6: 24577578-24582300 Arabidopsis lyrata
AL6G52490 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 24577578-24578077 Arabidopsis lyrata
AL6G52490 0.5kb downstream 0.5kb downstream 4723   true scaffold_6: 24578078-24582800 Arabidopsis lyrata
AL6G52490 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 24582301-24582800 Arabidopsis lyrata
AL6G52490 1.0kb upstream 1.0kb upstream 5223   true scaffold_6: 24577078-24582300 Arabidopsis lyrata
AL6G52490 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 24577078-24578077 Arabidopsis lyrata
AL6G52490 1.0kb downstream 1.0kb downstream 5223   true scaffold_6: 24578078-24583300 Arabidopsis lyrata
AL6G52490 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 24582301-24583300 Arabidopsis lyrata
AL6G52490 2.0kb upstream 2.0kb upstream 6223   true scaffold_6: 24576078-24582300 Arabidopsis lyrata
AL6G52490 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 24576078-24578077 Arabidopsis lyrata
AL6G52490 2.0kb downstream 2.0kb downstream 6223   true scaffold_6: 24578078-24584300 Arabidopsis lyrata
AL6G52490 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 24582301-24584300 Arabidopsis lyrata
AL6G52490 5.0kb upstream 5.0kb upstream 9223   true scaffold_6: 24573078-24582300 Arabidopsis lyrata
AL6G52490 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 24573078-24578077 Arabidopsis lyrata
AL6G52490 5.0kb downstream 5.0kb downstream 9223   true scaffold_6: 24578078-24587300 Arabidopsis lyrata
AL6G52490 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 24582301-24587300 Arabidopsis lyrata
AL6G52490 10.0kb upstream 10.0kb upstream 14223   true scaffold_6: 24568078-24582300 Arabidopsis lyrata
AL6G52490 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 24568078-24578077 Arabidopsis lyrata
AL6G52490 10.0kb downstream 10.0kb downstream 14223   true scaffold_6: 24578078-24592300 Arabidopsis lyrata
AL6G52490 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 24582301-24592300 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370910 5261 Brassicaceae View MSA
123837198 5264 Brassicales-Malvales View MSA
124345345 5266 SBM View MSA
124251610 5268 Malvidae View MSA
124070166 5270 Rosid View MSA
123740324 5271 Pentapetalae View MSA
122794495 5272 Eudicot View MSA
122046254 5273 Angiosperm View MSA
121349492 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain