Gene : AL6G50970 A. lyrata v2.1

Defline:  (1 of 2) K00106 - xanthine dehydrogenase/oxidase (XDH) Genomic Order:  3785
Name:  ? AL6G50970 Secondary Identifier:  ? PAC:35926537

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5695 Arabidopsis lyrata pathologic  
Alyrata PWY-6596 Arabidopsis lyrata pathologic  
Alyrata PWY-6606 Arabidopsis lyrata pathologic  
Alyrata PWY-6608 Arabidopsis lyrata pathologic  
Alyrata SALVADEHYPOX-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G50970 0.5kb upstream 0.5kb upstream 6980   true scaffold_6: 23853838-23860817 Arabidopsis lyrata
AL6G50970 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 23860318-23860817 Arabidopsis lyrata
AL6G50970 0.5kb downstream 0.5kb downstream 6980   true scaffold_6: 23853338-23860317 Arabidopsis lyrata
AL6G50970 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 23853338-23853837 Arabidopsis lyrata
AL6G50970 1.0kb upstream 1.0kb upstream 7480   true scaffold_6: 23853838-23861317 Arabidopsis lyrata
AL6G50970 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 23860318-23861317 Arabidopsis lyrata
AL6G50970 1.0kb downstream 1.0kb downstream 7480   true scaffold_6: 23852838-23860317 Arabidopsis lyrata
AL6G50970 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 23852838-23853837 Arabidopsis lyrata
AL6G50970 2.0kb upstream 2.0kb upstream 8480   true scaffold_6: 23853838-23862317 Arabidopsis lyrata
AL6G50970 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 23860318-23862317 Arabidopsis lyrata
AL6G50970 2.0kb downstream 2.0kb downstream 8480   true scaffold_6: 23851838-23860317 Arabidopsis lyrata
AL6G50970 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 23851838-23853837 Arabidopsis lyrata
AL6G50970 5.0kb upstream 5.0kb upstream 11480   true scaffold_6: 23853838-23865317 Arabidopsis lyrata
AL6G50970 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 23860318-23865317 Arabidopsis lyrata
AL6G50970 5.0kb downstream 5.0kb downstream 11480   true scaffold_6: 23848838-23860317 Arabidopsis lyrata
AL6G50970 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 23848838-23853837 Arabidopsis lyrata
AL6G50970 10.0kb upstream 10.0kb upstream 16480   true scaffold_6: 23853838-23870317 Arabidopsis lyrata
AL6G50970 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 23860318-23870317 Arabidopsis lyrata
AL6G50970 10.0kb downstream 10.0kb downstream 16480   true scaffold_6: 23843838-23860317 Arabidopsis lyrata
AL6G50970 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 23843838-23853837 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362794 5261 Brassicaceae View MSA
123840481 5264 Brassicales-Malvales View MSA
124343670 5266 SBM View MSA
124237947 5268 Malvidae View MSA
124061487 5270 Rosid View MSA
123746349 5271 Pentapetalae View MSA
122793870 5272 Eudicot View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain