Gene : AL6G51420 A. lyrata v2.1

Defline:  (1 of 1) 2.1.1.225 - tRNA:m(4)X modification enzyme Genomic Order:  3827
Name:  ? AL6G51420 Secondary Identifier:  ? PAC:35929278

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6829 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G51420 0.5kb upstream 0.5kb upstream 2663   true scaffold_6: 24071260-24073922 Arabidopsis lyrata
AL6G51420 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 24071260-24071759 Arabidopsis lyrata
AL6G51420 0.5kb downstream 0.5kb downstream 2663   true scaffold_6: 24071760-24074422 Arabidopsis lyrata
AL6G51420 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 24073923-24074422 Arabidopsis lyrata
AL6G51420 1.0kb upstream 1.0kb upstream 3163   true scaffold_6: 24070760-24073922 Arabidopsis lyrata
AL6G51420 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 24070760-24071759 Arabidopsis lyrata
AL6G51420 1.0kb downstream 1.0kb downstream 3163   true scaffold_6: 24071760-24074922 Arabidopsis lyrata
AL6G51420 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 24073923-24074922 Arabidopsis lyrata
AL6G51420 2.0kb upstream 2.0kb upstream 4163   true scaffold_6: 24069760-24073922 Arabidopsis lyrata
AL6G51420 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 24069760-24071759 Arabidopsis lyrata
AL6G51420 2.0kb downstream 2.0kb downstream 4163   true scaffold_6: 24071760-24075922 Arabidopsis lyrata
AL6G51420 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 24073923-24075922 Arabidopsis lyrata
AL6G51420 5.0kb upstream 5.0kb upstream 7163   true scaffold_6: 24066760-24073922 Arabidopsis lyrata
AL6G51420 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 24066760-24071759 Arabidopsis lyrata
AL6G51420 5.0kb downstream 5.0kb downstream 7163   true scaffold_6: 24071760-24078922 Arabidopsis lyrata
AL6G51420 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 24073923-24078922 Arabidopsis lyrata
AL6G51420 10.0kb upstream 10.0kb upstream 12163   true scaffold_6: 24061760-24073922 Arabidopsis lyrata
AL6G51420 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 24061760-24071759 Arabidopsis lyrata
AL6G51420 10.0kb downstream 10.0kb downstream 12163   true scaffold_6: 24071760-24083922 Arabidopsis lyrata
AL6G51420 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 24073923-24083922 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366038 5261 Brassicaceae View MSA
123828827 5264 Brassicales-Malvales View MSA
124336653 5266 SBM View MSA
124240790 5268 Malvidae View MSA
124062140 5270 Rosid View MSA
123739890 5271 Pentapetalae View MSA
122785784 5272 Eudicot View MSA
122046541 5273 Angiosperm View MSA
121347915 5274 Embryophyte View MSA
123424709 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain