Gene : AL6G49040 A. lyrata v2.1

Defline:  (1 of 2) PTHR23426:SF25 - ADRENODOXIN HOMOLOG, MITOCHONDRIAL Genomic Order:  3609
Name:  ? AL6G49040 Secondary Identifier:  ? PAC:35929329

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-1507 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G49040 0.5kb upstream 0.5kb upstream 2771   true scaffold_6: 22939362-22942132 Arabidopsis lyrata
AL6G49040 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 22939362-22939861 Arabidopsis lyrata
AL6G49040 0.5kb downstream 0.5kb downstream 2771   true scaffold_6: 22939862-22942632 Arabidopsis lyrata
AL6G49040 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 22942133-22942632 Arabidopsis lyrata
AL6G49040 1.0kb upstream 1.0kb upstream 3271   true scaffold_6: 22938862-22942132 Arabidopsis lyrata
AL6G49040 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 22938862-22939861 Arabidopsis lyrata
AL6G49040 1.0kb downstream 1.0kb downstream 3271   true scaffold_6: 22939862-22943132 Arabidopsis lyrata
AL6G49040 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 22942133-22943132 Arabidopsis lyrata
AL6G49040 2.0kb upstream 2.0kb upstream 4271   true scaffold_6: 22937862-22942132 Arabidopsis lyrata
AL6G49040 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 22937862-22939861 Arabidopsis lyrata
AL6G49040 2.0kb downstream 2.0kb downstream 4271   true scaffold_6: 22939862-22944132 Arabidopsis lyrata
AL6G49040 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 22942133-22944132 Arabidopsis lyrata
AL6G49040 5.0kb upstream 5.0kb upstream 7271   true scaffold_6: 22934862-22942132 Arabidopsis lyrata
AL6G49040 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 22934862-22939861 Arabidopsis lyrata
AL6G49040 5.0kb downstream 5.0kb downstream 7271   true scaffold_6: 22939862-22947132 Arabidopsis lyrata
AL6G49040 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 22942133-22947132 Arabidopsis lyrata
AL6G49040 10.0kb upstream 10.0kb upstream 12271   true scaffold_6: 22929862-22942132 Arabidopsis lyrata
AL6G49040 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 22929862-22939861 Arabidopsis lyrata
AL6G49040 10.0kb downstream 10.0kb downstream 12271   true scaffold_6: 22939862-22952132 Arabidopsis lyrata
AL6G49040 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 22942133-22952132 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343687 5261 Brassicaceae View MSA
123836973 5264 Brassicales-Malvales View MSA
124345879 5266 SBM View MSA
124241716 5268 Malvidae View MSA
124067802 5270 Rosid View MSA
123747158 5271 Pentapetalae View MSA
122792160 5272 Eudicot View MSA
122043528 5273 Angiosperm View MSA
121349592 5274 Embryophyte View MSA
123425610 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain