Gene : AL6G49480 A. lyrata v2.1
Defline:  (1 of 2) PTHR13832:SF193 - PROTEIN PHOSPHATASE 2C 1-RELATED Genomic Order:  3647
Name:  ? AL6G49480 Secondary Identifier:  ? PAC:35929575
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G49480 0.5kb upstream 0.5kb upstream 3450   true scaffold_6: 23174243-23177692 Arabidopsis lyrata
AL6G49480 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 23174243-23174742 Arabidopsis lyrata
AL6G49480 0.5kb downstream 0.5kb downstream 3450   true scaffold_6: 23174743-23178192 Arabidopsis lyrata
AL6G49480 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 23177693-23178192 Arabidopsis lyrata
AL6G49480 1.0kb upstream 1.0kb upstream 3950   true scaffold_6: 23173743-23177692 Arabidopsis lyrata
AL6G49480 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 23173743-23174742 Arabidopsis lyrata
AL6G49480 1.0kb downstream 1.0kb downstream 3950   true scaffold_6: 23174743-23178692 Arabidopsis lyrata
AL6G49480 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 23177693-23178692 Arabidopsis lyrata
AL6G49480 2.0kb upstream 2.0kb upstream 4950   true scaffold_6: 23172743-23177692 Arabidopsis lyrata
AL6G49480 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 23172743-23174742 Arabidopsis lyrata
AL6G49480 2.0kb downstream 2.0kb downstream 4950   true scaffold_6: 23174743-23179692 Arabidopsis lyrata
AL6G49480 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 23177693-23179692 Arabidopsis lyrata
AL6G49480 5.0kb upstream 5.0kb upstream 7950   true scaffold_6: 23169743-23177692 Arabidopsis lyrata
AL6G49480 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 23169743-23174742 Arabidopsis lyrata
AL6G49480 5.0kb downstream 5.0kb downstream 7950   true scaffold_6: 23174743-23182692 Arabidopsis lyrata
AL6G49480 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 23177693-23182692 Arabidopsis lyrata
AL6G49480 10.0kb upstream 10.0kb upstream 12950   true scaffold_6: 23164743-23177692 Arabidopsis lyrata
AL6G49480 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 23164743-23174742 Arabidopsis lyrata
AL6G49480 10.0kb downstream 10.0kb downstream 12950   true scaffold_6: 23174743-23187692 Arabidopsis lyrata
AL6G49480 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 23177693-23187692 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027541 5273 Angiosperm View MSA
122373602 5261 Brassicaceae View MSA
123828244 5264 Brassicales-Malvales View MSA
124338221 5266 SBM View MSA
124239512 5268 Malvidae View MSA
124064580 5270 Rosid View MSA
123739469 5271 Pentapetalae View MSA
122786449 5272 Eudicot View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain