Gene : AL6G50470 A. lyrata v2.1

Defline:  (1 of 1) K03943 - NADH dehydrogenase (ubiquinone) flavoprotein 2 (NDUFV2) Genomic Order:  3738
Name:  ? AL6G50470 Secondary Identifier:  ? PAC:35928011

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3781 Arabidopsis lyrata pathologic  
Alyrata PWY-4302 Arabidopsis lyrata pathologic  
Alyrata PWY-5083 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G50470 0.5kb upstream 0.5kb upstream 3434   true scaffold_6: 23614283-23617716 Arabidopsis lyrata
AL6G50470 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 23617217-23617716 Arabidopsis lyrata
AL6G50470 0.5kb downstream 0.5kb downstream 3434   true scaffold_6: 23613783-23617216 Arabidopsis lyrata
AL6G50470 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 23613783-23614282 Arabidopsis lyrata
AL6G50470 1.0kb upstream 1.0kb upstream 3934   true scaffold_6: 23614283-23618216 Arabidopsis lyrata
AL6G50470 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 23617217-23618216 Arabidopsis lyrata
AL6G50470 1.0kb downstream 1.0kb downstream 3934   true scaffold_6: 23613283-23617216 Arabidopsis lyrata
AL6G50470 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 23613283-23614282 Arabidopsis lyrata
AL6G50470 2.0kb upstream 2.0kb upstream 4934   true scaffold_6: 23614283-23619216 Arabidopsis lyrata
AL6G50470 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 23617217-23619216 Arabidopsis lyrata
AL6G50470 2.0kb downstream 2.0kb downstream 4934   true scaffold_6: 23612283-23617216 Arabidopsis lyrata
AL6G50470 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 23612283-23614282 Arabidopsis lyrata
AL6G50470 5.0kb upstream 5.0kb upstream 7934   true scaffold_6: 23614283-23622216 Arabidopsis lyrata
AL6G50470 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 23617217-23622216 Arabidopsis lyrata
AL6G50470 5.0kb downstream 5.0kb downstream 7934   true scaffold_6: 23609283-23617216 Arabidopsis lyrata
AL6G50470 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 23609283-23614282 Arabidopsis lyrata
AL6G50470 10.0kb upstream 10.0kb upstream 12934   true scaffold_6: 23614283-23627216 Arabidopsis lyrata
AL6G50470 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 23617217-23627216 Arabidopsis lyrata
AL6G50470 10.0kb downstream 10.0kb downstream 12934   true scaffold_6: 23604283-23617216 Arabidopsis lyrata
AL6G50470 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 23604283-23614282 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368476 5261 Brassicaceae View MSA
123830423 5264 Brassicales-Malvales View MSA
124338790 5266 SBM View MSA
124243026 5268 Malvidae View MSA
124065216 5270 Rosid View MSA
123739093 5271 Pentapetalae View MSA
122789216 5272 Eudicot View MSA
122047748 5273 Angiosperm View MSA
121350810 5274 Embryophyte View MSA
123425059 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain