Gene : AL6G49870 A. lyrata v2.1

Defline:  (1 of 2) K01090 - protein phosphatase (E3.1.3.16) Genomic Order:  3681
Name:  ? AL6G49870 Secondary Identifier:  ? PAC:35927717

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G49870 0.5kb upstream 0.5kb upstream 7212   true scaffold_6: 23296343-23303554 Arabidopsis lyrata
AL6G49870 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 23296343-23296842 Arabidopsis lyrata
AL6G49870 0.5kb downstream 0.5kb downstream 7212   true scaffold_6: 23296843-23304054 Arabidopsis lyrata
AL6G49870 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 23303555-23304054 Arabidopsis lyrata
AL6G49870 1.0kb upstream 1.0kb upstream 7712   true scaffold_6: 23295843-23303554 Arabidopsis lyrata
AL6G49870 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 23295843-23296842 Arabidopsis lyrata
AL6G49870 1.0kb downstream 1.0kb downstream 7712   true scaffold_6: 23296843-23304554 Arabidopsis lyrata
AL6G49870 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 23303555-23304554 Arabidopsis lyrata
AL6G49870 2.0kb upstream 2.0kb upstream 8712   true scaffold_6: 23294843-23303554 Arabidopsis lyrata
AL6G49870 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 23294843-23296842 Arabidopsis lyrata
AL6G49870 2.0kb downstream 2.0kb downstream 8712   true scaffold_6: 23296843-23305554 Arabidopsis lyrata
AL6G49870 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 23303555-23305554 Arabidopsis lyrata
AL6G49870 5.0kb upstream 5.0kb upstream 11712   true scaffold_6: 23291843-23303554 Arabidopsis lyrata
AL6G49870 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 23291843-23296842 Arabidopsis lyrata
AL6G49870 5.0kb downstream 5.0kb downstream 11712   true scaffold_6: 23296843-23308554 Arabidopsis lyrata
AL6G49870 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 23303555-23308554 Arabidopsis lyrata
AL6G49870 10.0kb upstream 10.0kb upstream 16712   true scaffold_6: 23286843-23303554 Arabidopsis lyrata
AL6G49870 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 23286843-23296842 Arabidopsis lyrata
AL6G49870 10.0kb downstream 10.0kb downstream 16712   true scaffold_6: 23296843-23313554 Arabidopsis lyrata
AL6G49870 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 23303555-23313554 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376920 5261 Brassicaceae View MSA
123834950 5264 Brassicales-Malvales View MSA
124344185 5266 SBM View MSA
124243421 5268 Malvidae View MSA
124067118 5270 Rosid View MSA
123741777 5271 Pentapetalae View MSA
122797136 5272 Eudicot View MSA
122049960 5273 Angiosperm View MSA
121349504 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain