Gene : AL6G48390 A. lyrata v2.1
Defline:  (1 of 3) K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Genomic Order:  3549
Name:  ? AL6G48390 Secondary Identifier:  ? PAC:35926585
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G48390 0.5kb upstream 0.5kb upstream 4769   true scaffold_6: 22589323-22594091 Arabidopsis lyrata
AL6G48390 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 22589323-22589822 Arabidopsis lyrata
AL6G48390 0.5kb downstream 0.5kb downstream 4769   true scaffold_6: 22589823-22594591 Arabidopsis lyrata
AL6G48390 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 22594092-22594591 Arabidopsis lyrata
AL6G48390 1.0kb upstream 1.0kb upstream 5269   true scaffold_6: 22588823-22594091 Arabidopsis lyrata
AL6G48390 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 22588823-22589822 Arabidopsis lyrata
AL6G48390 1.0kb downstream 1.0kb downstream 5269   true scaffold_6: 22589823-22595091 Arabidopsis lyrata
AL6G48390 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 22594092-22595091 Arabidopsis lyrata
AL6G48390 2.0kb upstream 2.0kb upstream 6269   true scaffold_6: 22587823-22594091 Arabidopsis lyrata
AL6G48390 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 22587823-22589822 Arabidopsis lyrata
AL6G48390 2.0kb downstream 2.0kb downstream 6269   true scaffold_6: 22589823-22596091 Arabidopsis lyrata
AL6G48390 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 22594092-22596091 Arabidopsis lyrata
AL6G48390 5.0kb upstream 5.0kb upstream 9269   true scaffold_6: 22584823-22594091 Arabidopsis lyrata
AL6G48390 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 22584823-22589822 Arabidopsis lyrata
AL6G48390 5.0kb downstream 5.0kb downstream 9269   true scaffold_6: 22589823-22599091 Arabidopsis lyrata
AL6G48390 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 22594092-22599091 Arabidopsis lyrata
AL6G48390 10.0kb upstream 10.0kb upstream 14269   true scaffold_6: 22579823-22594091 Arabidopsis lyrata
AL6G48390 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 22579823-22589822 Arabidopsis lyrata
AL6G48390 10.0kb downstream 10.0kb downstream 14269   true scaffold_6: 22589823-22604091 Arabidopsis lyrata
AL6G48390 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 22594092-22604091 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373990 5261 Brassicaceae View MSA
123827998 5264 Brassicales-Malvales View MSA
124346804 5266 SBM View MSA
124240765 5268 Malvidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain