Gene : AL6G46840 A. lyrata v2.1

Defline:  (1 of 3) PTHR10634:SF38 - ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 1-RELATED Genomic Order:  3404
Name:  ? AL6G46840 Secondary Identifier:  ? PAC:35928389

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G46840 0.5kb upstream 0.5kb upstream 1988   true scaffold_6: 21711905-21713892 Arabidopsis lyrata
AL6G46840 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 21711905-21712404 Arabidopsis lyrata
AL6G46840 0.5kb downstream 0.5kb downstream 1988   true scaffold_6: 21712405-21714392 Arabidopsis lyrata
AL6G46840 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 21713893-21714392 Arabidopsis lyrata
AL6G46840 1.0kb upstream 1.0kb upstream 2488   true scaffold_6: 21711405-21713892 Arabidopsis lyrata
AL6G46840 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 21711405-21712404 Arabidopsis lyrata
AL6G46840 1.0kb downstream 1.0kb downstream 2488   true scaffold_6: 21712405-21714892 Arabidopsis lyrata
AL6G46840 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 21713893-21714892 Arabidopsis lyrata
AL6G46840 2.0kb upstream 2.0kb upstream 3488   true scaffold_6: 21710405-21713892 Arabidopsis lyrata
AL6G46840 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 21710405-21712404 Arabidopsis lyrata
AL6G46840 2.0kb downstream 2.0kb downstream 3488   true scaffold_6: 21712405-21715892 Arabidopsis lyrata
AL6G46840 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 21713893-21715892 Arabidopsis lyrata
AL6G46840 5.0kb upstream 5.0kb upstream 6488   true scaffold_6: 21707405-21713892 Arabidopsis lyrata
AL6G46840 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 21707405-21712404 Arabidopsis lyrata
AL6G46840 5.0kb downstream 5.0kb downstream 6488   true scaffold_6: 21712405-21718892 Arabidopsis lyrata
AL6G46840 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 21713893-21718892 Arabidopsis lyrata
AL6G46840 10.0kb upstream 10.0kb upstream 11488   true scaffold_6: 21702405-21713892 Arabidopsis lyrata
AL6G46840 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 21702405-21712404 Arabidopsis lyrata
AL6G46840 10.0kb downstream 10.0kb downstream 11488   true scaffold_6: 21712405-21723892 Arabidopsis lyrata
AL6G46840 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 21713893-21723892 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379626 5261 Brassicaceae View MSA
123840865 5264 Brassicales-Malvales View MSA
124339440 5266 SBM View MSA
124251311 5268 Malvidae View MSA
124063038 5270 Rosid View MSA
123746917 5271 Pentapetalae View MSA
122796829 5272 Eudicot View MSA
122050732 5273 Angiosperm View MSA
121349866 5274 Embryophyte View MSA
123428230 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain