Gene : AL6G45010 A. lyrata v2.1

Defline:  (1 of 2) PTHR13215:SF6 - RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP Genomic Order:  3244
Name:  ? AL6G45010 Secondary Identifier:  ? PAC:35928673

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G45010 0.5kb upstream 0.5kb upstream 2463   true scaffold_6: 20618412-20620874 Arabidopsis lyrata
AL6G45010 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 20620375-20620874 Arabidopsis lyrata
AL6G45010 0.5kb downstream 0.5kb downstream 2463   true scaffold_6: 20617912-20620374 Arabidopsis lyrata
AL6G45010 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 20617912-20618411 Arabidopsis lyrata
AL6G45010 1.0kb upstream 1.0kb upstream 2963   true scaffold_6: 20618412-20621374 Arabidopsis lyrata
AL6G45010 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 20620375-20621374 Arabidopsis lyrata
AL6G45010 1.0kb downstream 1.0kb downstream 2963   true scaffold_6: 20617412-20620374 Arabidopsis lyrata
AL6G45010 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 20617412-20618411 Arabidopsis lyrata
AL6G45010 2.0kb upstream 2.0kb upstream 3963   true scaffold_6: 20618412-20622374 Arabidopsis lyrata
AL6G45010 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 20620375-20622374 Arabidopsis lyrata
AL6G45010 2.0kb downstream 2.0kb downstream 3963   true scaffold_6: 20616412-20620374 Arabidopsis lyrata
AL6G45010 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 20616412-20618411 Arabidopsis lyrata
AL6G45010 5.0kb upstream 5.0kb upstream 6963   true scaffold_6: 20618412-20625374 Arabidopsis lyrata
AL6G45010 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 20620375-20625374 Arabidopsis lyrata
AL6G45010 5.0kb downstream 5.0kb downstream 6963   true scaffold_6: 20613412-20620374 Arabidopsis lyrata
AL6G45010 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 20613412-20618411 Arabidopsis lyrata
AL6G45010 10.0kb upstream 10.0kb upstream 11963   true scaffold_6: 20618412-20630374 Arabidopsis lyrata
AL6G45010 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 20620375-20630374 Arabidopsis lyrata
AL6G45010 10.0kb downstream 10.0kb downstream 11963   true scaffold_6: 20608412-20620374 Arabidopsis lyrata
AL6G45010 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 20608412-20618411 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362680 5261 Brassicaceae View MSA
123841225 5264 Brassicales-Malvales View MSA
124342237 5266 SBM View MSA
124243257 5268 Malvidae View MSA
124066656 5270 Rosid View MSA
123749288 5271 Pentapetalae View MSA
122790546 5272 Eudicot View MSA
122043186 5273 Angiosperm View MSA
121348005 5274 Embryophyte View MSA
123427584 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain