Gene : AL6G46180 A. lyrata v2.1

Defline:  (1 of 1) PTHR11592//PTHR11592:SF42 - GLUTATHIONE PEROXIDASE // SUBFAMILY NOT NAMED Genomic Order:  3340
Name:  ? AL6G46180 Secondary Identifier:  ? PAC:35929412

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-4081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G46180 0.5kb upstream 0.5kb upstream 2365   true scaffold_6: 21315320-21317684 Arabidopsis lyrata
AL6G46180 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 21317185-21317684 Arabidopsis lyrata
AL6G46180 0.5kb downstream 0.5kb downstream 2365   true scaffold_6: 21314820-21317184 Arabidopsis lyrata
AL6G46180 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 21314820-21315319 Arabidopsis lyrata
AL6G46180 1.0kb upstream 1.0kb upstream 2865   true scaffold_6: 21315320-21318184 Arabidopsis lyrata
AL6G46180 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 21317185-21318184 Arabidopsis lyrata
AL6G46180 1.0kb downstream 1.0kb downstream 2865   true scaffold_6: 21314320-21317184 Arabidopsis lyrata
AL6G46180 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 21314320-21315319 Arabidopsis lyrata
AL6G46180 2.0kb upstream 2.0kb upstream 3865   true scaffold_6: 21315320-21319184 Arabidopsis lyrata
AL6G46180 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 21317185-21319184 Arabidopsis lyrata
AL6G46180 2.0kb downstream 2.0kb downstream 3865   true scaffold_6: 21313320-21317184 Arabidopsis lyrata
AL6G46180 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 21313320-21315319 Arabidopsis lyrata
AL6G46180 5.0kb upstream 5.0kb upstream 6865   true scaffold_6: 21315320-21322184 Arabidopsis lyrata
AL6G46180 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 21317185-21322184 Arabidopsis lyrata
AL6G46180 5.0kb downstream 5.0kb downstream 6865   true scaffold_6: 21310320-21317184 Arabidopsis lyrata
AL6G46180 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 21310320-21315319 Arabidopsis lyrata
AL6G46180 10.0kb upstream 10.0kb upstream 11865   true scaffold_6: 21315320-21327184 Arabidopsis lyrata
AL6G46180 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 21317185-21327184 Arabidopsis lyrata
AL6G46180 10.0kb downstream 10.0kb downstream 11865   true scaffold_6: 21305320-21317184 Arabidopsis lyrata
AL6G46180 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 21305320-21315319 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365650 5261 Brassicaceae View MSA
123838420 5264 Brassicales-Malvales View MSA
124336450 5266 SBM View MSA
124242823 5268 Malvidae View MSA
124066443 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain