Gene : AL6G46080 A. lyrata v2.1

Defline:  (1 of 4) PTHR15141:SF38 - BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3333
Name:  ? AL6G46080 Secondary Identifier:  ? PAC:35929918

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G46080 0.5kb upstream 0.5kb upstream 4125   true scaffold_6: 21259860-21263984 Arabidopsis lyrata
AL6G46080 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 21263485-21263984 Arabidopsis lyrata
AL6G46080 0.5kb downstream 0.5kb downstream 4125   true scaffold_6: 21259360-21263484 Arabidopsis lyrata
AL6G46080 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 21259360-21259859 Arabidopsis lyrata
AL6G46080 1.0kb upstream 1.0kb upstream 4625   true scaffold_6: 21259860-21264484 Arabidopsis lyrata
AL6G46080 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 21263485-21264484 Arabidopsis lyrata
AL6G46080 1.0kb downstream 1.0kb downstream 4625   true scaffold_6: 21258860-21263484 Arabidopsis lyrata
AL6G46080 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 21258860-21259859 Arabidopsis lyrata
AL6G46080 2.0kb upstream 2.0kb upstream 5625   true scaffold_6: 21259860-21265484 Arabidopsis lyrata
AL6G46080 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 21263485-21265484 Arabidopsis lyrata
AL6G46080 2.0kb downstream 2.0kb downstream 5625   true scaffold_6: 21257860-21263484 Arabidopsis lyrata
AL6G46080 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 21257860-21259859 Arabidopsis lyrata
AL6G46080 5.0kb upstream 5.0kb upstream 8625   true scaffold_6: 21259860-21268484 Arabidopsis lyrata
AL6G46080 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 21263485-21268484 Arabidopsis lyrata
AL6G46080 5.0kb downstream 5.0kb downstream 8625   true scaffold_6: 21254860-21263484 Arabidopsis lyrata
AL6G46080 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 21254860-21259859 Arabidopsis lyrata
AL6G46080 10.0kb upstream 10.0kb upstream 13625   true scaffold_6: 21259860-21273484 Arabidopsis lyrata
AL6G46080 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 21263485-21273484 Arabidopsis lyrata
AL6G46080 10.0kb downstream 10.0kb downstream 13625   true scaffold_6: 21249860-21263484 Arabidopsis lyrata
AL6G46080 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 21249860-21259859 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361625 5261 Brassicaceae View MSA
123835232 5264 Brassicales-Malvales View MSA
124340035 5266 SBM View MSA
124238007 5268 Malvidae View MSA
124060513 5270 Rosid View MSA
123750667 5271 Pentapetalae View MSA
122787903 5272 Eudicot View MSA
122044451 5273 Angiosperm View MSA
121346556 5274 Embryophyte View MSA
123380406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain